| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1821 |
|---|
| Symbol | |
|---|
| ID | 7860443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2083139 |
|---|
| End bp | 2084293 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643865912 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002881839 |
|---|
| Protein GI | 229820313 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.317719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0945618 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGAGG GGCAAGATGC TGCGATGGGG CGTTGGCGAC TGACGCGCGC GGCGGACGTG
GTCGCCGCGG CCGTCGTGCT GCTCCTGACC GTGCCGAGCT CGATCGGGCT GCTGTGGTCG
GCAGGCGGGT GGGCGTCCGT GGTGGGAGGC GTCTGCGGCG CCGTGCTCGT GGCCACGTTG
CTCGCCCGCC GCGCCCACCC GTGGCCCAGC TTCTGGGCAA GCTGCGCGGC CCTGCTCGTC
CTGCTCGCGC TGCCTCGCCT GCCGGAGGGG CTGTCCATGG TGTTCCTGCC GGTGAGCCTG
ATCCATCTGC TCGTGGTGCA CGCGGTCGTG GCGGGGACGG GCCGGTGGCG GCTGCCGCTC
GCCGTGTCGC TCGTCGGTCT CGGCCTCATC GTCGCGCGCA CGGTGCTGGA CGTCCCCGAT
CCTCTCGACT GGGGCACGTT CTGGGTGCTC GTGCCGTTCA CGGCGCTCGT GCTGGCGGGG
AGCTGCGTGC TCGGCGCCCG CGACTGGGAA CGCCGCCAGC TCCAGGAGCA TCGCCTCCAC
GAAGCCGTCG CCCGGGAACG CGAGCTCATG GCGCGGGAGG TGCACGACGT CGTCGCGCAC
TCGTTGACGG TGGTCGTGGC GCAGGCCGAC GCGGCGCTGC TCGTCATGGA GGCCGACCCG
CAGCGCTCAC GCACGATGGT GAGCAACGCC GTGACGACCG GCCGGGAGGC GATGGCGGAG
ATGCAGCGGG TGGTCCGCGT GCTGCGGGAC GGCGCTCCGC CGGGGGCGCC GGTCCGGTCG
CTGCACGACC TCGACACGCT CGTCGCGTCG TCGCGGAGCG CGACGGCGGG GATCGAGCTG
GTGGTCGACG GCGACGTCGA CCGGGTGGAC CCCGAGATAG CCCGGGCGGT CTACCGCATC
GTCCAGGAGT CGCTCACGAA CGCCGTGAAG CACGGCACGC GGCCTCCGCG CTGCCGGGTG
GACGTGCGGG TCGACGCCCG CGGCGTCAGC GTCTCGGTGC ACGACGACGG CCCCGGCCTC
ACCGGTCGCG AGCCCGCGGA TGCGGGCTTC GGGATCCTCG GCATCCGCGA GCGCGCCAGG
AGCCTCGGCG GTCGCGTGGA CATCGCGAGC GACGCCTCCG GGACGCGGGT CAGCGCATGG
CTGCCGACGA CGTGA
|
|---|
| Protein sequence | MPEGQDAAMG RWRLTRAADV VAAAVVLLLT VPSSIGLLWS AGGWASVVGG VCGAVLVATL
LARRAHPWPS FWASCAALLV LLALPRLPEG LSMVFLPVSL IHLLVVHAVV AGTGRWRLPL
AVSLVGLGLI VARTVLDVPD PLDWGTFWVL VPFTALVLAG SCVLGARDWE RRQLQEHRLH
EAVARERELM AREVHDVVAH SLTVVVAQAD AALLVMEADP QRSRTMVSNA VTTGREAMAE
MQRVVRVLRD GAPPGAPVRS LHDLDTLVAS SRSATAGIEL VVDGDVDRVD PEIARAVYRI
VQESLTNAVK HGTRPPRCRV DVRVDARGVS VSVHDDGPGL TGREPADAGF GILGIRERAR
SLGGRVDIAS DASGTRVSAW LPTT
|
|---|
| |