Gene Bcav_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1806 
Symbol 
ID7861316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2067876 
End bp2068907 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content74% 
IMG OID643865896 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_002881824 
Protein GI229820298 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.276179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.01953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CGCTGCGTCA GACCGCGCCC ACGACGGCGT CCCGCATCCT CGGCGTGGGC 
GGCCTCCGCG GAGAGGACGT CGTCCCGAAC GACGAGATCG TCGGGCCGAT CAACTCCTCC
GACGAGTGGA TCCGACAGCG GACCGGCATC GTCTCGCGGC GGCGCGCCAA GCCGACGACG
ACGCTCGCCG ACCTCGCCGA GGGCGCGGCA CGCGCTGCGC TCGACGCCGC GGGGATCGAC
GCGTCGCAGG TCGACGCCGT GCTCGTGTCC ACGGTGACGT ACTTCGAGCA GACGCCGTCC
ATCGCGGCGG TGCTCACCGA CCGCCTCGGC GCCACCCCCG CGGCCGCGTA CGACATCTCC
GCCGCGTGCG CCGGGTACTG CTACGGGATC GCCCAGGCCG ACGCGATGGT GCGTTCCGGC
GTCGCCCGCC ACGTGCTCGT GGTCGGCGTC GAGAAGATGT CCGACTTCAT CGACCCGACC
GACCGCACGA TCTCGTTCCT CCTCGGCGAC GGCGCGGGCG CCGCCGTCGT CGGCCCGTCC
GACGTCCCGG GCATCGGCCC GACGGTGTGG GGGTCGGACG GCGCCCAGTC GCGCGTCATC
TTCCAGACGG AGCCGTGGCT CGCGTTCCGG CGCGCGGCCG GCGAGGGCGT CCCCGCCGGG
CTCGAGGGCG TCAGCTGGCC GACCCTGCGG CAGGAGGGAC CGACGGTCTT CAAGTGGGTC
ATCTCGCAGA TGCCGGACGT CGCCCGCCGC GCCGTCGCCG CGGCCGGGCT CGAGATGGGC
GACATCGACG TCTTCATCCC GCACCAGGCG AACATGCGGA TCACGGACCA GCTGGTGAAG
CTGCTCAAGC TGGGCCCCGA GGTCGCCGTC GGTCGCGACA TCGCCGAGAC CGGCAACACG
TCGGCGGCGT CCGTCCCGCT CGCCACGGAG CGCCTGCTGC GCGAGGGCGC CGCGAAGAGC
GGCGACGTCG CCCTGCAGAT CGGGTTCGGC GCCGGGCTCG TCTACGCGGC ACAGGTCGTC
GTCCTGCCCT GA
 
Protein sequence
MTATLRQTAP TTASRILGVG GLRGEDVVPN DEIVGPINSS DEWIRQRTGI VSRRRAKPTT 
TLADLAEGAA RAALDAAGID ASQVDAVLVS TVTYFEQTPS IAAVLTDRLG ATPAAAYDIS
AACAGYCYGI AQADAMVRSG VARHVLVVGV EKMSDFIDPT DRTISFLLGD GAGAAVVGPS
DVPGIGPTVW GSDGAQSRVI FQTEPWLAFR RAAGEGVPAG LEGVSWPTLR QEGPTVFKWV
ISQMPDVARR AVAAAGLEMG DIDVFIPHQA NMRITDQLVK LLKLGPEVAV GRDIAETGNT
SAASVPLATE RLLREGAAKS GDVALQIGFG AGLVYAAQVV VLP