Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1801 |
Symbol | |
ID | 7861311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2064196 |
End bp | 2064858 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643865891 |
Product | hypothetical protein |
Protein accession | YP_002881819 |
Protein GI | 229820293 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.103223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00869097 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGCCTGACG TGCTCGAGGG CCCGGTCGAG GACGACGGCG CGAGCGGCGT CCTGACCGCG TACGTGCCCG GGACGATCCG GGCGGACGCC GCCTGGGATG ACGTCCGAGA GGGGTACGCC ACCCTGCTCG AAGGGCTCGG ACGGGCGGCG ACCGATGATC ACGAGCTCGG GCGTCCGCGC TCGTGGTGCG GCGGTGCCCA GTGGCCGGAC GTCGTGCAAT ACCGACTCGT GCCGTTGCTG CCGTCCGACG TCGGCCGCAG GGCCGCCCGA CTCGTCCACG ACGTTCTCGG TGCGGAGGCG GAGGCGTCGC CCGTCCTCGT GCACGGTGAC CTCGGGCCCC ACAACGTGAC CTGGGCGGTC GACGCCGGCG GGGCGCTGAC GCCGGTCGGT CTGCTCGACG TCGATCACGC GGCGCACGGT GATCCGGCGA TCGACGTCGC GCCCCTGGTC GGCGCGTTCG GAGCCGCGGC CGTGGCCGAC CTCGTGACGG CCGAGACTCT CGCGCGCGCG ATGCGCCATC GCGCCACCCT CAGTCTCCAG GTCGCGGCGG CCGCCGAGCT GATCGACGAC GTCAGCCTCC GGGACCATGC CCTCGCCAAC GTCGTCAGCC GCGCGCGTGC GGGCACCCTC TACGACCCGG GTGGGTCAGC CCCGTCCGAC TGA
|
Protein sequence | MPDVLEGPVE DDGASGVLTA YVPGTIRADA AWDDVREGYA TLLEGLGRAA TDDHELGRPR SWCGGAQWPD VVQYRLVPLL PSDVGRRAAR LVHDVLGAEA EASPVLVHGD LGPHNVTWAV DAGGALTPVG LLDVDHAAHG DPAIDVAPLV GAFGAAAVAD LVTAETLARA MRHRATLSLQ VAAAAELIDD VSLRDHALAN VVSRARAGTL YDPGGSAPSD
|
| |