Gene Bcav_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1788 
SymboldnaG 
ID7861296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2049705 
End bp2051708 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content74% 
IMG OID643865876 
ProductDNA primase 
Protein accessionYP_002881806 
Protein GI229820280 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0286526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.367245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGCC GCATCCGACG TGAGGACATC GGGGCGGTGC GCGAGAAGGC CCGCATCGAG 
GAGATCGTCG GGGACCACGT CTCGCTGCGC AGCGCGGGCG TCGGCTCGAT GAAGGGTCTG
TGCCCGTTCC ACGACGAGCG GACGCCGTCG TTCCACGTCA GGCCGCAGCT GGGGCTCTGG
CACTGCTTCG GCTGCGACGA GGGCGGCGAC GTCATCTCGT TCGTGCAGAA GATCGACCAC
CTGACGTTCA CGGAGGCGAT CGAGCGGCTC GCCGCCCGGA CCGGCGTCGT GCTGCGGTAC
GAGGACGACG GCGGCGGCAC GTCGCGCCCG CGGGAGGAGC CGGGGCGGCG CCAGCGGCTC
GTCGAGGCGC ACCGGATCGC GTCCGAGTAC TACGCGGAGC AGCTCGCCGC GCCCGAGGCC
GAGCCCGCGC GAACGTTCCT GGCGGAGCGC GGGTTCGACC GTGCCGCCGC GCAGACGTTC
GGGGTGGGCT ACGCGCCGAA GGGCTGGGAC CACCTGCTGC GGCACCTGCG CGGGCGCGGG
TTCACGGAGG CCGAGCTGGC GGCGAGCGGG CTCGTGTCCC AGGGGAACCG GGGCCACTAC
GACCGGTTCC GCGGCCGCCT CATGTGGCCC ATCCGGGACA TCACCGGCGA CGTCATCGGC
TTCGGGGCGC GGCACCTGTA CGCCGACGAC CCCGGTCCGA AGTACCTCAA CACGCCCGAG
ACGCCGATCT ACCGCAAGTC CCAGGTGCTC TACGGGATCG ACGTGGCGAA ACGAGAAATC
GCGAAGGAGC GGCAGGTCGT CGTCGTCGAG GGCTACACCG ACGTCATGGC GGCGCACCTC
GCCGGCATCG GGACGGCGAT CGCGACGTGC GGGACGGCGT TCGGCGCGGA TCACGTGCGG
ATCGTGCGGC GGCTGCTCGG TGACGCCGCC GACTCCTCGG CGGGCGTGAT GCTCGCGAGC
GGTCGCGCCG TCGGCGGCGA GGTGATCTTC ACGTTCGACG GCGACGAGGC CGGCCAGAAG
GCGGCCCTGC GGGCGTTCGG GGAGGACCAG CAGTTCGCGT CCCAGACGTT CGTGGCCGTC
TCGCCCGACG GGCTCGACCC GTGCGACCTT CGCCTGCAGC GCGGTGACGC GGCCGTGCGC
GCTCTCGTCT CCGAGCGGGA GCCGCTGTTC GAGTTCGCGA TCCGGTCGGT GCTGGCCCGG
GTCGACCTGG ACACGCCGGA GGGGCGGGTC GCGGGATTGC GGGTCGCCGC GCCCGTCGTG
GCGCGGATCC GGGACCACGC CCTGCGCGGG GAGTACGCGC GCGAGCTGGC CGGGTGGCTC
GGGATGGACG TCGTGGACGT GCGTCGCGCG GTCGCGTCGG CTCCACGCGG CGACGCCCGC
CCGCGGGGCG ACGCGCGGTC CGCCGACGGG CGCCCGGACG GTGGCCGAGG CGAGACGCGG
GCCGGCGACG ACTCCGGGCG GTCCGCGCAG CGACGTCCGG CACAGCCGTA CCCGGACGAT
CCGGTGGCGA AGCTCGAGCG CCAGGTGCTC GAGGTGGCGC TGCAGCTCCC CGCATTCGCG
GCGGACGCCG GTTTCGACAG CCTCGACGCC GCGGCGTTCC AGGTGCCCGC CTACCGTGCT
GTGCACGATG CCGTGCGGGC CGCCGGGGGA GCGGCGGCGT TCGAGACGTT CCGCGAGCAG
CAGCGCGCCG CCGGCGCCGC CGACGTGGAC CGGGCAGCGG CGGCCGCCTG GTCCGACGCG
GTGCTGGAGG GTGCGGTCGG CCCGCTCGCC TCGCTCGTGA CGGAGCTCGC CGTCGCACCT
CTGCCCGCCG ACCGCGAGGA GGCCCTCGGT GGGTACGCGC GAGGCGTGGT GCGAGCGGTC
GTCCGCCTCG GTGTCACGCG CAAGATCGGG GACATCAGGG GGCGGCTGCA GCGGATGGAT
GCCGCGAGCG AGGAGTACCA GGCGGCGTTC GCGGAGCTGC TCGTGCTCGA GCAGGAGCGA
CGGGGTCTGA CTGACGCGAG CTGA
 
Protein sequence
MAGRIRREDI GAVREKARIE EIVGDHVSLR SAGVGSMKGL CPFHDERTPS FHVRPQLGLW 
HCFGCDEGGD VISFVQKIDH LTFTEAIERL AARTGVVLRY EDDGGGTSRP REEPGRRQRL
VEAHRIASEY YAEQLAAPEA EPARTFLAER GFDRAAAQTF GVGYAPKGWD HLLRHLRGRG
FTEAELAASG LVSQGNRGHY DRFRGRLMWP IRDITGDVIG FGARHLYADD PGPKYLNTPE
TPIYRKSQVL YGIDVAKREI AKERQVVVVE GYTDVMAAHL AGIGTAIATC GTAFGADHVR
IVRRLLGDAA DSSAGVMLAS GRAVGGEVIF TFDGDEAGQK AALRAFGEDQ QFASQTFVAV
SPDGLDPCDL RLQRGDAAVR ALVSEREPLF EFAIRSVLAR VDLDTPEGRV AGLRVAAPVV
ARIRDHALRG EYARELAGWL GMDVVDVRRA VASAPRGDAR PRGDARSADG RPDGGRGETR
AGDDSGRSAQ RRPAQPYPDD PVAKLERQVL EVALQLPAFA ADAGFDSLDA AAFQVPAYRA
VHDAVRAAGG AAAFETFREQ QRAAGAADVD RAAAAAWSDA VLEGAVGPLA SLVTELAVAP
LPADREEALG GYARGVVRAV VRLGVTRKIG DIRGRLQRMD AASEEYQAAF AELLVLEQER
RGLTDAS