Gene Bcav_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1787 
Symbol 
ID7861295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2048844 
End bp2049614 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content71% 
IMG OID643865875 
Productoxidoreductase 
Protein accessionYP_002881805 
Protein GI229820279 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03560] probable F420-dependent oxidoreductase, Rv1855c family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.737797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.187733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTGC GCATCGCCGT CCAGATCCAG CCCCAGCACG CCGACTACTC GGCCATCCGC 
GACGCCGTCC GCCGGTCCGA GGACCTCGGC GTCGACATCA TCTTCAACTG GGACCACTTC
TTCCCGCTCC GCGGGGACGC AGACGGCAAG CACTTCGAGT GCTGGACCAT GCTCGGCGCC
TGGGCCGAGC AGACCGAGCG GGTCGAGATC GGCGCGCTGG TCACGTGCAA CTCGTACCGC
AACCCCGATC TCCTCGCCGA CATGGCCCGC ACCGTCGACC ACATGTCCGG CGGCCGGCTC
ATCCTCGGCA TCGGTGCCGG CTGGTTCGAG CGGGACTACG ACGACTTCGG CTACGAGTTC
GGCACGGCGG GTGCCCGCAT CGCCGACCTG GCCGAGGCCA TGCCCCGGAT CAAGGCGCGA
TGGGCCGCGT CGAACCCCAC CCCGACGCGG GACATCCCGA TCCTCATCGG GGGTGGCGGC
GAGAAGAAGA CGCTGCGGAT CGTCGCCGAG CACGCCGACG CCTGGCACTC GTTCGGCGAC
GTCACGACGC TGCGCCGCAA GAGTGCGATC CTCGACGAGC ACGGGGCCGC CGTCGGACGC
GACACGGCGA CCCTCGTCGA ACGGTCCATC GGCGTCAGCG CACCGCCGGA GGCCGTCGCG
CAGCCGCTCG TCGACGCCGG GGCCACGCTG TTCACGATCG GGGCGAGCGG TCCGGACTAC
GACCTGTCGC TGGTCGAGAA GTGGATCGCC TGGCGCGACG CCCAGCGCTG A
 
Protein sequence
MTLRIAVQIQ PQHADYSAIR DAVRRSEDLG VDIIFNWDHF FPLRGDADGK HFECWTMLGA 
WAEQTERVEI GALVTCNSYR NPDLLADMAR TVDHMSGGRL ILGIGAGWFE RDYDDFGYEF
GTAGARIADL AEAMPRIKAR WAASNPTPTR DIPILIGGGG EKKTLRIVAE HADAWHSFGD
VTTLRRKSAI LDEHGAAVGR DTATLVERSI GVSAPPEAVA QPLVDAGATL FTIGASGPDY
DLSLVEKWIA WRDAQR