| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1785 |
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| Symbol | |
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| ID | 7861293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2045636 |
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| End bp | 2047435 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643865873 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002881803 |
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| Protein GI | 229820277 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.326803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAC CGACGGACCT GACGACCACG ACGACGACGC TCGTCTCGTC GGCGCACGAC
GGCCCGACGG CGTGGTGGCG CTCCGCCGTC ATCTACCAGG TGTACCCGCG CTCGTTCGCG
GACTCCGACG GCGACGGGTA CGGCGACATC CCCGGCATCA CGTCGCGGCT CGGGCACCTC
GCGCGGCTCG GCGTCGACGC CGTCTGGCTC TCCCCCTTCT ACCGCAGCCC CCAGGCCGAC
GCCGGCTACG ACGTCGCCGA CTACCGGGAC GTGGACCCGC TCTTCGGCAC GCTCGACCAC
GTCGACGAGC TCATCGCCCG CGCCCACCAG CTCGGGCTGC GCGTGATCGT CGACCTGGTC
CCGAACCACA CGTCGGACGA CCACGCCTGG TTCGGTGCGG CCCTCGCGTC GCCCCCTGGC
TCGCCCGAGC GGGCGCGGTA CCACTTCGCT GACGGACGCG GCGACGGCGG AAGCGAACCG
CCGAACAACT GGACGAGCGT GTTCGGCGGC CCCGCCTGGA CGCGGAGCCG AGGTGCGGAC
GGCGAGCCCG GGCAGTGGTA CCTGCACCTG TTCGACTCGC GGCAGCCCGA CCTCAACTGG
GCCGATCCCG GCGTGCGTGC CGAGTTCGTC TCGGTCCTGC GGTTCTGGCT CGACCGCGGG
GTGGACGGCT TCCGCGTCGA CGTCGCGCAC GGCATGGTCA AGCAGGACGG CCTGCCGGAC
TGGGCCGGGC ACTCGGCGAT GATCGCGGAG GACGAGCACC AGCAGGCACC TGAGCCGGAC
ACCGACGCGG AGCCCGAGGT CGGCGCCGCG GGGCCGATGT GGGACCAGGA GGGCGTCCAC
GAGATCTACC GCGAGTGGCG GGAGGTGCTC GAGGGCTACG ACGGCGACCG CGTGCTCGTC
GCCGAGGCGT GGGTGTCTCC CCTGTCCCGG CTGGCGCGGT ACGTCCGCGA CGGCGAGATG
CACCAGGCGT TCAACTTCGC GTTCCTCACG ACCCACTGGT TCGCGCCGCA GCTGCGCGAG
GTCGTCGAGG ACTCGGTGCG CGCCAACGAC GTCGTCGGGG CACCGACCAC CTGGGTCCTG
TCGAACCACG ACGTGGTCCG GCACGCGTCC CGGCTCGGTC TGCCGCACCC CGGCGGCAAG
GCGGCACCGA TCGGCCCCGG CGACCCGCAG CCGGACGAGG CCCTCGGCCT GCGCCGCGCC
CGGGCGGCAG CTCTGCTGAT GCTCGCCCTG CCCGGATCGG CCTACCTGTA CCAGGGCGAG
GAGCTGGGGC TGCCGGAGCA CACGACGCTC GACGACGCCC TCCGCCAGGA CCCGGCGTTC
TCCCGCTCCG CCGGCGCGGA CCGCGGCCGG GACGGGTGCC GGGTCCCGCT GCCGTGGGCG
GCTGACGCCC CGGCTCTCGG CTTCTCCCCC ACGGGTGCGG CGTGGCTGCC GCAGCCGGAC
TCGTGGTCCG CCTACGCCCT CGACGCCCAG AAGGGCGTGG CGGGCTCGAC GTACGAGCTG
TACCGGGAGG CGCTGCGTCT GCGGCGCGAC TACCGCCTCG GAACCGGCTC GCTCGCCTGG
GTCGAGGGCC TGCCCGCAGA CGCCCACGAG ACGGCCGTGG TCCTCGTGAA CCGCGACGTC
GTCGTCGCCA CGAACCTCGG CCCGCGCCCG CAGCCCCTGC CGGCCGGGAT CGAGATCCTC
CTCGCCAGCG CCGAGATCCT CACCGACGAC GACGGCGTCC GGCACCTCCC GTCGGACGTC
ACCGTGTGGG CGCGGCTGAC CGAGGCCGCC CTCGAACGAT CCCCGATCGG ACCGGACTGA
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| Protein sequence | MTAPTDLTTT TTTLVSSAHD GPTAWWRSAV IYQVYPRSFA DSDGDGYGDI PGITSRLGHL
ARLGVDAVWL SPFYRSPQAD AGYDVADYRD VDPLFGTLDH VDELIARAHQ LGLRVIVDLV
PNHTSDDHAW FGAALASPPG SPERARYHFA DGRGDGGSEP PNNWTSVFGG PAWTRSRGAD
GEPGQWYLHL FDSRQPDLNW ADPGVRAEFV SVLRFWLDRG VDGFRVDVAH GMVKQDGLPD
WAGHSAMIAE DEHQQAPEPD TDAEPEVGAA GPMWDQEGVH EIYREWREVL EGYDGDRVLV
AEAWVSPLSR LARYVRDGEM HQAFNFAFLT THWFAPQLRE VVEDSVRAND VVGAPTTWVL
SNHDVVRHAS RLGLPHPGGK AAPIGPGDPQ PDEALGLRRA RAAALLMLAL PGSAYLYQGE
ELGLPEHTTL DDALRQDPAF SRSAGADRGR DGCRVPLPWA ADAPALGFSP TGAAWLPQPD
SWSAYALDAQ KGVAGSTYEL YREALRLRRD YRLGTGSLAW VEGLPADAHE TAVVLVNRDV
VVATNLGPRP QPLPAGIEIL LASAEILTDD DGVRHLPSDV TVWARLTEAA LERSPIGPD
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