Gene Bcav_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1783 
Symbol 
ID7861291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2044367 
End bp2045269 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID643865871 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002881801 
Protein GI229820275 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3833] ABC-type maltose transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.556978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGC AGACCGCGAC CCCGTCCACC CGCCGCGCCG CGCCGGTCCG CCGCGGCTCG 
TTCGGCCGGT GGGCGGCCGA CCTGGGCTGG CGGCACCTCG TCGGCGTGAT CTTCGTCGTG
TTCGCCGCGT TCCCGCTCGT CTACGTCGTC TCCGCGTCCC TCGCGCCGGG GGGCACGCTC
ACGGGCTCGA ACGCGCTGTT CGCCGCCGTG GACTCGGCCA ACTATGCGGA CCTCGGAGCC
ACGGCGTTCT GGACCTGGTT CGGCAACACG ATGATGATCG CCGTCGTCAC GAGCCTCGGC
ACGGTCCTCA TGGGCGCCGC CGCGGCGTAC GCGTTCTCCC GGTTCCGCTT CTCGGGACGA
CGCGTCGGGC TGACGTCCCT CCTCGTGGTC CAGATGTTCC CGCAGATGCT CGCGTTCGTG
GCGATCTTCC TGCTGCTGCT CGGGCTGGGG AACGTCGTGC CGGCGCTCGG CCTCAACAGC
AGGGTCGCGC TGATCTGCGT GTACCTCGGC GGAGCGCTCG GAGTGAACAC GTTCCTCATG
TACGGGTTCT TCAACACGGT GCCCAAGGAG CTGGACGAGG CGGCGAAGAT CGACGGTGCC
ACCCACGCCC AGATCTACTG GACGATCATC CTGCGGCTCG TCGTGCCGAT CCTCGCGGTG
GTCGGTCTGC TGTCGTTCAT CTCGACGTTC AGCGAGTTCA TCGTGGCGCG GATCGTGCTG
CAGTCGGAGA GCAACTGGAC GCTCGCCGTC GGGCTCTACA GCTGGGTGTC GTCGCAGCTC
GACGCGAACT GGGGACTCTT CGCGGCGGGC GCGGTGATCT CAGCGATCCC CGTGCTCGTG
CTGTTCCTGT TCCTGCAGAA GTACATCGTG GGCGGGCTGA CCGCCGGCTC CGTCAAGGGC
TGA
 
Protein sequence
MATQTATPST RRAAPVRRGS FGRWAADLGW RHLVGVIFVV FAAFPLVYVV SASLAPGGTL 
TGSNALFAAV DSANYADLGA TAFWTWFGNT MMIAVVTSLG TVLMGAAAAY AFSRFRFSGR
RVGLTSLLVV QMFPQMLAFV AIFLLLLGLG NVVPALGLNS RVALICVYLG GALGVNTFLM
YGFFNTVPKE LDEAAKIDGA THAQIYWTII LRLVVPILAV VGLLSFISTF SEFIVARIVL
QSESNWTLAV GLYSWVSSQL DANWGLFAAG AVISAIPVLV LFLFLQKYIV GGLTAGSVKG