| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1779 |
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| Symbol | |
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| ID | 7861287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 2038967 |
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| End bp | 2040160 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643865867 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_002881797 |
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| Protein GI | 229820271 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.081766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACTC TGCGACTCGG GCCGCTCGCG CTCGGCACGC CCGTCGTGCT CGCCCCCATG
GCGGGCGTGA CGAACGCGCC GTTCCGCGCG CTCTGCCGTG CCGCGGGCCG GGACGGCCTG
GGCGCCGACG CGTCGTCCGA CGTGCTGGCC AGCGACGCTC CCGAGGGGCT GTACGTCTCC
GAGATGGTGA CGTCGCGGGC ACTCGTCGAG CGGACGCCGG AGTCCATGCG GATCATCACC
GCCGCTCCCG ACGAGCGGGT GCGCAGCGTG CAGCTCTACG GCGTCGACCC CGCCACCGTT
CGCCTCGCGG CGCGCATGCT CGTCACCGAG GACCGCGCCG ACCACATCGA CCTCAACTTC
GGGTGCCCCG TGCCGAAGGT GACCCGCAAG GGTGGCGGCG CCGTCCTGCC GTGGAAACGC
GACCTGTTCG CCGCCATCGT GCGCGCCGCC GTCGACGAGG CGGCGCCGTC GGGCGTGCCC
GTGACGGTGA AGATGCGGAT GGGCATCGAC GACGACCACC TCACCTACCT CGACGCCGGC
CTGCTCGCGC AGGAGGCCGG AGCCGCGTGG GTGGCGCTGC ACGCCCGGAC GGCCGAGCAG
TACTACTCCG GCGAGGCGCG GTGGGAGGCG ATCGCGCGGC TCAAGGAGAC GGTCACCGAC
GTCCCGGTCC TGGGCAACGG CGACATCTGG TCCGCGGAGG ACGCGCTCGC GATGGTGCAG
CAGACCGGGT GCGACGGCGT CGTCGTCGGC CGCGGCTGCC AGGGCCGACC GTGGCTGTTC
ACGGACCTGG TGGCCGGGTT CGCCGGCTCG GCTCGGAGGG TGCGGCCCGG CCTGGCCGAC
GTCGCGGCGA CGTTCCGGCG CCACGCGGAG CTCATGGTCG ATCACTTCGG CGAGGAGGAG
CGTGCCCTGC GCGAGCTGCG CAAGCACGCG TCCTGGTACC TCAAGGGTTA CGTCGTGGGC
GGCGAGGCGC GCGCCGCGCT CGGTCTGGTG TCGTCGCTCG CCGAGCTGGA CGACAGGCTC
GCCGCGCTCG ACCTCGACCA GGCGTACCCG GGCGAGGGCG CCGAGGGGCC GCGCGGCCGG
GCGGGGTCGC CGAAGGCGCC CAGCGTGCCG GCAGGCTGGC TCGACTCGCG CGACGTCGAC
GCCGAGCTGC GCGCGATGCT CGCGGAGGCG GAGCTGAGCG TCTCAGGGGG CTGA
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| Protein sequence | MTTLRLGPLA LGTPVVLAPM AGVTNAPFRA LCRAAGRDGL GADASSDVLA SDAPEGLYVS
EMVTSRALVE RTPESMRIIT AAPDERVRSV QLYGVDPATV RLAARMLVTE DRADHIDLNF
GCPVPKVTRK GGGAVLPWKR DLFAAIVRAA VDEAAPSGVP VTVKMRMGID DDHLTYLDAG
LLAQEAGAAW VALHARTAEQ YYSGEARWEA IARLKETVTD VPVLGNGDIW SAEDALAMVQ
QTGCDGVVVG RGCQGRPWLF TDLVAGFAGS ARRVRPGLAD VAATFRRHAE LMVDHFGEEE
RALRELRKHA SWYLKGYVVG GEARAALGLV SSLAELDDRL AALDLDQAYP GEGAEGPRGR
AGSPKAPSVP AGWLDSRDVD AELRAMLAEA ELSVSGG
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