Gene Bcav_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1778 
Symbol 
ID7861286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2038091 
End bp2038861 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content76% 
IMG OID643865866 
Producthypothetical protein 
Protein accessionYP_002881796 
Protein GI229820270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00279828 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCTACT TCCACCGCGT CGACGAGACG TCGTTCCGCC CCACGGACCA CGTGTCCGGC 
GCCTGGAACA CCCGGGAGCA GCACATCGCG CCGGCGCTCG GCCTGCTGGC GCACCTCGTC
GAGGTCGACC GGGACGCCCG CGGGCGGCAC GACCTGGCGG TCACGCGGCT CTCGTACGAC
ATCTGGGGGA CGATCCCGCT CGACGTCGTG CACACCGCCG TGCGGGTGCT CAGGCCGGGC
CGCAGCGTCG AGCTCGTGGA GGCCGAGCTG TCGCACGGCC AGAGGCGCGG CCTCACGCTC
CGCGCCTGGC TCACGCAGGC GGGCGACACC GCCACGCTCG CCGCGACGGA CCTGCCGGCA
CTCCCCGGCC CCGACACCAT GGACCCGTGG GACCCCGCCA CGGTCTGGCC CGGCGGGTTC
ATCCGGTCGG TCGAGGTGCG GCGCGTCGCG CTCGGCCCGG GCCGGGCGGG GTTCTGGGTC
CGGACCGACG TGCCGCTCCT GGACGGGGAG CCGGTGAGCC CTCTCGCCCG GGCGGCCGGA
CTGATCGACG GCTCCAACGG CCTCACGGTG CGCGCGGACC CGCGCGAGGT GGCGTTCCCC
AACGTCGACC TGACCGCGCA CGCGTTCCGA GCGCCCGACG ACGGCTGGCT CGGCTTCGAC
ACCGCCGTCT CGTTCGGGCC CACGGGCGCC GGTCTCACCA GCAGCGTCCT CCACGACGCG
GGCGGGCCGT GGGGCACGAG CGCGCAGAGC CTCCTCGTCC GGCGGCTCTG A
 
Protein sequence
MPYFHRVDET SFRPTDHVSG AWNTREQHIA PALGLLAHLV EVDRDARGRH DLAVTRLSYD 
IWGTIPLDVV HTAVRVLRPG RSVELVEAEL SHGQRRGLTL RAWLTQAGDT ATLAATDLPA
LPGPDTMDPW DPATVWPGGF IRSVEVRRVA LGPGRAGFWV RTDVPLLDGE PVSPLARAAG
LIDGSNGLTV RADPREVAFP NVDLTAHAFR APDDGWLGFD TAVSFGPTGA GLTSSVLHDA
GGPWGTSAQS LLVRRL