Gene Bcav_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1770 
Symbol 
ID7861278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2029923 
End bp2031539 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content70% 
IMG OID643865858 
Productprotein of unknown function DUF187 
Protein accessionYP_002881788 
Protein GI229820262 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACAGC TCAACCACAC GCACGACGGC GCCCCGCACG GCGTGCAACG CCGCACGTTC 
CTCACACTCG CCACGGCCGG GGTCGCGGCG AGCACGCTCA CCGTCACCGT CGGCTCCATG
ACGCCGGCGG CGGCCACGCC GTCGGCGGAT CCCGCTGCGT TCCTCAAGCG TGAGCTGCGC
GCGATGTGGA TCTCGTCGGT GGTGAACATC GACTGGCCGT CCGCCACCGG CCTGAGCGCC
GAGGCGCAGC AGGCGGAGTA CCTGCACTGG CTCGACGTCG CTCAGGACTT CCGCCTCAAC
GCCGTGTTCG TCCAGGTGCG CCCCACCGCT GACGCGTTCT GGCCGTCGCC GCACGAGCCG
TGGTCGCAGT ACCTCACGGG CGTGCAGGGC CAGGACCCCG GCTACGACCC GCTCGCGTTC
ATCGTGGAGG AGACCCACAA GCGCAACCTT GAGCTGCACA CCTGGTACAA CCCGTACCGC
GTGTCGATGC AGGCGGACCC GGCGCAGCTG GTCCCGGAGC ACCCGGCGCG CGTGCACCCC
GACTGGATCT GGCCGTACGG CGGCAAGCTC TACTTCGACC CGGGGCTCCC CGAGACGCAG
GAGCACATCC AGGCGGCGAT CCTGCACTCC GTCGAGAACT ATGACATCGA CGGCGTCCAC
TTCGACGACT ACTTCTACCC GTACCCGGTC GCCGGGCAGA CGATCCCGGA CGCCGAGACG
TACGCGACGT ACGGCGCCGG GTTCGACGAC GTCGGGGACT GGCGTCGGCA CAACGTCGAC
ACGTTCATCT CGTCGATCTC CGCGCGGATC AAGCAGGTCA AGCCCTGGGT GAAGTTCGGC
ATCAGCCCGT TCGGGATCTG GCGCAACGAC ACCACCGACC CGCTCGGGTC CGCGACGCGC
GGCTCCCAGT CCTACGACCT GCAGTTCGCC GACACCCGGA AGTGGGTGCT GGAGGGCTGG
CTGGACTACA TCAACCCGCA GGTCTACTGG CAGATCGGCC TCGCCGTCGC CGACTACTCG
GTGCTCGTGC CCTGGTGGGC GGACGTGGCC GCGACCAGCG GGACGCACCT GTACATCGGG
GAGGCGTTGT ACAAGGTGAC CTCCGGCGTC TTCACCGACC CGGCCGAGCT GGCGAACCAC
CTCGCGCTCG ACCGCGACGT GACCGAGACC GTCGGGCCCG TGCACGGCAA CGTCTACTTC
TCGGCGAAGC ACGTGCCGGC CGACCCGGCG GGCTCGATGT CCCTGGTGCG CGACGGCTAC
TACGTGCACC CCGCACTGGT CCCGACGATG CCGCACCTGC CGGGCACGGA GGTGCGGACA
CCCCTCCTCG CTCTGGCGAA CTGGCGCGAC GACGGCGTCC GCGTGCACTG GACGGACATC
GGCGGCCGTC GGCACCGGGC GACGTCGTTC GCGATCTATC GCGTCGAGGG CCACCACCGC
GAGATCGACG TCGAGAACCC CGCGACGCTC ATCGCCACGC AGCGCGCCGA GCGGCACCTG
GTCCAGGACT ACCTGGACGC GAGCGCGGTG CCCGGCACGC CGTACTCCTA CGCCGTGACA
GCGCTGGACC GGCTGTGGAA CGAGTCGGCG CCCTCCCGCG TGCGGTGGGC GATCTAG
 
Protein sequence
MGQLNHTHDG APHGVQRRTF LTLATAGVAA STLTVTVGSM TPAAATPSAD PAAFLKRELR 
AMWISSVVNI DWPSATGLSA EAQQAEYLHW LDVAQDFRLN AVFVQVRPTA DAFWPSPHEP
WSQYLTGVQG QDPGYDPLAF IVEETHKRNL ELHTWYNPYR VSMQADPAQL VPEHPARVHP
DWIWPYGGKL YFDPGLPETQ EHIQAAILHS VENYDIDGVH FDDYFYPYPV AGQTIPDAET
YATYGAGFDD VGDWRRHNVD TFISSISARI KQVKPWVKFG ISPFGIWRND TTDPLGSATR
GSQSYDLQFA DTRKWVLEGW LDYINPQVYW QIGLAVADYS VLVPWWADVA ATSGTHLYIG
EALYKVTSGV FTDPAELANH LALDRDVTET VGPVHGNVYF SAKHVPADPA GSMSLVRDGY
YVHPALVPTM PHLPGTEVRT PLLALANWRD DGVRVHWTDI GGRRHRATSF AIYRVEGHHR
EIDVENPATL IATQRAERHL VQDYLDASAV PGTPYSYAVT ALDRLWNESA PSRVRWAI