Gene Bcav_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1746 
Symbol 
ID7861254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1997037 
End bp1998395 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content73% 
IMG OID643865834 
Productintegral membrane protein 
Protein accessionYP_002881764 
Protein GI229820238 
COG category[S] Function unknown 
COG ID[COG5473] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.415451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.647155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC CGACCGGCCC GGAGAACCCG GAAGGCTCCG ACGAGAGCCG TGAGTCCACG 
GGCCCTGACG CGCCGCTGCC CCCGGACGAG CCGTCGGTCT CGCAGGAGCC TCCCGCGGAG
CCGGTGATCC CGCCGGCGCC CCCCGTCGAG CCGGGCGTGC CGCCGGCACC TCCGGCGGAG
CCCGTGATCC CGCCGGCCGA GCCGGTGGTG CCGCCCGCTC CGCCGGTCGA GCCGGAGGCG
CCGCCCGTCG TGCCGCCGGT GGTCCCGCCG CCGAGCCCGC CGGCCGAGCA GGTGGTGCCG
CCCGCGCCAC CCGTCGTGCC GCCGGCTCCC GCCCCGGAGC CCGACGCGCC GCAGGCTCAG
AGCTATGCCG CACCGCCGCC TCCGGCGAGC GCCTATCCGC CGCCGGACCA GGGCGGGTTC
ACCGGGGGGG CCGCCGTCCC GCCACCGCCC GCGCAGCCGG GCTCCGAGCT CCCACCGCAG
GCACAGCCTG CGGCCGTCCC GCCGCCTCCG GCGCAGCCGG GCTTCTCGCC CCCGCCCGCT
CAGGCTGGCG GTTTCCCGCC GCCCCCGCCC GGCCAAGGTG GGTTCCCGCC TCCTCCCGGT
CAGGGTGGTG GCTTCCCGCC GCCTCCGCAG GGTGGGTTTC CGCCGCCTCC GCAGGGCGGG
TTCCCGCCGC CGGGCGGCGC GTACGCCAGC CAGGTCCAGG CGACCGACGG CTTCTCCTGG
GGCTGGAAGA AGTTCACGGA GAACTGGGGC ACGCTCGTCC TCGCCCAGCT GCTGTGGGGC
CTGATCATCG CCGCTCTGGT GATCCTCTGG TCGTTCATCA TCATCGGGAT CGGGCGCGCG
GCTGCGGGCT CGGGTTCTGC GACGGAGGAC GCGTTCAGCG TGCTCGGCTT CTTCGGCACG
GTGGTGCTCT TCTTCGCCGT CATCGCGGGC GCCTTCCTGT CCCAGATCGG CATGGTGCAC
GGCTACCTCG AGATCGCGAA CGGCAAGCCG GTCACGCTGA AGGACTTCTT CACGTTCAAG
AACGTGGGAG CCGCGCTGGG CGCGACCCTC CTCATCGCGC TGGCCTCGAT GGTGGGATCG
TTCATCATCG TCGGCGGCCT CATCGTGCTG TTCTTCGCGC TCTACGTCAT CTGGTTCATC
GTCGACCAGC GACGTGGAGC CATCGACGGC ATCAAGGCGG GCATCAACCT CTCGGCGAAC
AACTTCGGGC AGACGGCGCT TCTGCTGCTC CTCGTGCTCG TCGCCAACGC GGTCGGGAGC
GCTCTGTGCG GGATCGGGAC ACTGATCTCC GCCCCGCTCG GCAACCTGGC GACCACGTAC
ATGTACCGCA GGCTGCAGAA CCAGCCCGTC GCACCCTGA
 
Protein sequence
MSNPTGPENP EGSDESREST GPDAPLPPDE PSVSQEPPAE PVIPPAPPVE PGVPPAPPAE 
PVIPPAEPVV PPAPPVEPEA PPVVPPVVPP PSPPAEQVVP PAPPVVPPAP APEPDAPQAQ
SYAAPPPPAS AYPPPDQGGF TGGAAVPPPP AQPGSELPPQ AQPAAVPPPP AQPGFSPPPA
QAGGFPPPPP GQGGFPPPPG QGGGFPPPPQ GGFPPPPQGG FPPPGGAYAS QVQATDGFSW
GWKKFTENWG TLVLAQLLWG LIIAALVILW SFIIIGIGRA AAGSGSATED AFSVLGFFGT
VVLFFAVIAG AFLSQIGMVH GYLEIANGKP VTLKDFFTFK NVGAALGATL LIALASMVGS
FIIVGGLIVL FFALYVIWFI VDQRRGAIDG IKAGINLSAN NFGQTALLLL LVLVANAVGS
ALCGIGTLIS APLGNLATTY MYRRLQNQPV AP