Gene Bcav_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1745 
Symbol 
ID7861253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1995728 
End bp1996945 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content76% 
IMG OID643865833 
Productoxygen-independent coproporphyrinogen III oxidase 
Protein accessionYP_002881763 
Protein GI229820237 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.911119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCAGC TGCCTGACGG CGACCCGCCG CCGTCGGACG GTTCGCTCCC GGCGTCGGTG 
CTGCCCGGGG CGGACGAGCG CGCGTTCGGG GTCTATCTCC ACGTCCCGTT CTGCCGGGTG
CGGTGCGGGT ACTGCGACTT CAACACGTAC ACGGCGAGCG AGCTCGGCGG CGGCGCGAGC
CAGGCCGCTT ATGCGGCGAC GGCGCAGCGG GAGATCGCGC TGGCGGCGCG GGTCCTCGCG
TCGTCGGGTC TGCCCGAGCG CCGGGTCGAG ACGGTCTTCG TGGGCGGCGG GACGCCCACC
CTGCTGCCGC CCGGCGACCT CGCGGGACTG GTGCGCGCCG TCGACGACGC GTGGGGCCTC
GCTCCAGGCG CTGAGGTCAC GACCGAGGCG AACCCCGACT CGGTGACGCC GGAATCGTTG
GCAGCGCTCG CCGACGCGGG GTTCACGCGC GTGTCGTTCG GGATGCAGTC CGCGGTCCCG
CACGTGCTCG CCACGCTGGA CCGCACCCAC GATCCCGCCC GCCTGCCCGC CGTCGTCGCG
TGGGCGCGCG ACGCCGGTCT GGCCGTCTCG CTGGACCTCA TCTACGGGAC GCCCGGGGAG
ACGCTCGACG ACTGGCGCGT CAGCCTCGAG AAGGCCGTCG CGCTCGATCC GGACCACGTG
TCGGCGTACG CCCTCGTCGT GGAGCCGGGG ACGGCGATGG GTCGGCAGGC GGCGCGCGGT
GAGCTCCCGG CTCCGGACGG CGACGACGAG GCGGCGAAGT ACGAGCTGGC CGACGCCGTG
CTCGCCGACG CCGGGTACTC CTGGTACGAG ATCAGCAACT TCGCCCGGAC CTCGGCCGAC
GAGTGCCGCC ACAACCTCGC CTACTGGCGC GGCGACGACT GGTGGGGGAT CGGGCCCGGG
GCGCACAGCC ACGTCGGGGG CGTCCGGTGG TGGAACGTCA AGCACCCGCG CGCGTACGCC
GGCCGGCTCG AGGCCGCCAC CTCGCCGGCC GCGGGCCGGG AGACGCTCGA CGACGACGCG
CGCGAGCTCG AACGCGTGCT GCTCGGGATC CGCCTCGCGA CCGGCCTGGA CGCCGAGCGC
GCGGACGCCG CCGCGGTGGC CGAGCTCGCC CGCGGCGGGT TGGTGAGCGT CCGGTCGCCG
GGCGACGGCG GCCGGCGTCT CGTGCTCACG CGGCGCGGGA GGCTGCTCGC CGACACGGTG
GTTCGCGCGC TGACCTGA
 
Protein sequence
MPQLPDGDPP PSDGSLPASV LPGADERAFG VYLHVPFCRV RCGYCDFNTY TASELGGGAS 
QAAYAATAQR EIALAARVLA SSGLPERRVE TVFVGGGTPT LLPPGDLAGL VRAVDDAWGL
APGAEVTTEA NPDSVTPESL AALADAGFTR VSFGMQSAVP HVLATLDRTH DPARLPAVVA
WARDAGLAVS LDLIYGTPGE TLDDWRVSLE KAVALDPDHV SAYALVVEPG TAMGRQAARG
ELPAPDGDDE AAKYELADAV LADAGYSWYE ISNFARTSAD ECRHNLAYWR GDDWWGIGPG
AHSHVGGVRW WNVKHPRAYA GRLEAATSPA AGRETLDDDA RELERVLLGI RLATGLDAER
ADAAAVAELA RGGLVSVRSP GDGGRRLVLT RRGRLLADTV VRALT