Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1744 |
Symbol | |
ID | 7861252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1993802 |
End bp | 1995703 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643865832 |
Product | GTP-binding protein LepA |
Protein accession | YP_002881762 |
Protein GI | 229820236 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCGTAC CGACCCCCGC ACAGCTCGAG CGGATCCGCC CCGCCGCGAC GCCGCCGGCG CAGCTGCGCA ACTTCTGCAT CATCGCGCAC ATCGACCACG GCAAGTCGAC GCTCGCCGAC CGCATGCTGC AGCTCACGGG TGTCGTCGAC GCGCGGGCCA TGCGTGCCCA GTACCTCGAC CGCATGGACA TCGAGCGAGA GCGCGGCATC ACGATCAAGT CGCAGGCCGT CCGGATGCCG TGGGCCGCAG CCCAGGGCGG CGAGGCGGGC GCGCCGCTCG TCCCGTACGC CCTCAACATG ATCGACACCC CGGGGCACGT CGACTTCTCC TACGAGGTGT CGCGCTCGCT GGCCGCGTGC GAGGGCGCCG TCCTGCTCGT CGACGCCGCC CAGGGCATCG AGGCGCAGAC GCTCGCCAAC CTGTACCTCG CGCTCGAGAA CGACCTCGTC GTCATCCCGG TGCTCAACAA GATCGACCTG CCGGCGGCCC AGCCGGAGAA GTACGCGGCC GAGCTGGCGA ACCTCATCGG CGGCGACCCC GAGGACTGCC TGCGCGTCTC GGGCAAGACC GGCGAGGGTG TCGAGGAGCT GCTCGACCGG ATCGTCGCCG ACGTGCCGCC ACCGGTCGGC GACCCCGACG CCCCCGCGCG GGCCATGATC TTCGACTCCG TCTACGACAC CTACCGCGGC GTCGTGACGT ACGTCCGCGT CGTCGACGGC TCCCTGTCGC CGCGCGAGCG GATCGCGATG ATGTCGACGC GCGCCACGCA CGAGCTGCTC GAGATCGGCG TGAGCTCGCC CGAGCCGGCG CCGACGCAGG GGCTCGGCGT CGGCGAGGTC GGCTATCTCA TCACCGGCGT CAAGGACGTG CGCCAGTCGC GCGTGGGCGA CACCGTGACG AACTCGGCGA AGCCGGCGAC GACGGCGCTC GGCGGGTACC GGGATCCGAA GCCGATGGTG TTCTCGGGCC TGTATCCGAT CGACGGCAGC GACTACCCGG TGCTCCGGGA CGCCCTCGAC AAGCTCAAGC TCAACGACGC CGCCCTGGTC TACGAGCCGG AGACGTCGGT GGCCCTCGGC TTCGGGTTCC GGTGCGGCTT CCTCGGTCTG CTGCACATGG AGATCGTGCG TGAGCGGCTC GAGCGCGAGT TCGACCTCGA GCTCATCTCG ACGGCGCCCA ACGTCGTCTA CGAGGTGACG ATGGAGGACG GCACGCACCA CACGGTGACC AACCCGAGCG AGTACCCGGC GGGAAAGATC CACGAGGTCC GCGAGCCCGT GGTGCGGGCG ACGATCCTCG CCCCGAGCGA GTTCGTCGGC GCGATCATGG AGCTGTGCCA GAGCCGGCGC GGCTCGCTCG GCGGCATGGA CTACCTCTCC GAGGACCGCG TCGAGATGCG CTACACGCTG CCGCTCGCGG AGATCGTGTT CGACTTCTTC GACCAGCTGA AGTCGCGCAC GCGCGGCTAC GCCTCGCTCG ACTACGAGCC GCAGGGCGAC CAGGTCGCTG ATCTCGTCAA GGTCGACATC CTGCTGCAGG GCGAGCACGT GGACGCGTTC AGCGCGATCG TGCACAAGGA CAAGGCGTAC GCGTACGGCG TCATGATGGC GGGCAAGCTG CGCGAGCTCA TCCCGCGCCA GCAGTTCGAG GTGCCGATCC AGGCGGCCGT CGGGTCGCGC ATCATCGCCC GGGAGACGAT CCGCGCGATC CGCAAGGACG TGCTCGCCAA GTGCTATGGC GGCGACATCA CCCGCAAGCG CAAGCTCCTC GAGAAGCAGA AGGAGGGGAA GAAGCGCATG AAGATGGTCG GCCGGGTCGA GGTCCCGCAG GAGGCGTTCA TCGCCGCGCT CTCCTCCGAC TCGCCGACGG GGAAGGACGC CAAGGAGAAG GCGCGCAAGT GA
|
Protein sequence | MPVPTPAQLE RIRPAATPPA QLRNFCIIAH IDHGKSTLAD RMLQLTGVVD ARAMRAQYLD RMDIERERGI TIKSQAVRMP WAAAQGGEAG APLVPYALNM IDTPGHVDFS YEVSRSLAAC EGAVLLVDAA QGIEAQTLAN LYLALENDLV VIPVLNKIDL PAAQPEKYAA ELANLIGGDP EDCLRVSGKT GEGVEELLDR IVADVPPPVG DPDAPARAMI FDSVYDTYRG VVTYVRVVDG SLSPRERIAM MSTRATHELL EIGVSSPEPA PTQGLGVGEV GYLITGVKDV RQSRVGDTVT NSAKPATTAL GGYRDPKPMV FSGLYPIDGS DYPVLRDALD KLKLNDAALV YEPETSVALG FGFRCGFLGL LHMEIVRERL EREFDLELIS TAPNVVYEVT MEDGTHHTVT NPSEYPAGKI HEVREPVVRA TILAPSEFVG AIMELCQSRR GSLGGMDYLS EDRVEMRYTL PLAEIVFDFF DQLKSRTRGY ASLDYEPQGD QVADLVKVDI LLQGEHVDAF SAIVHKDKAY AYGVMMAGKL RELIPRQQFE VPIQAAVGSR IIARETIRAI RKDVLAKCYG GDITRKRKLL EKQKEGKKRM KMVGRVEVPQ EAFIAALSSD SPTGKDAKEK ARK
|
| |