Gene Bcav_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1662 
Symbol 
ID7859604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1904206 
End bp1905024 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content72% 
IMG OID643865750 
Producthypothetical protein 
Protein accessionYP_002881680 
Protein GI229820154 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.247981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGC CCGACACCGA CGCTCTGCCC AGCCGGATCG GGCTGGTGGC GTTCGACCTC 
GACGACACGC TCGCGCCCTC GAAGACGGCG ATCGACCCGG TCATGTCCGC CCTGCTGGGC
GAGCTGCTCG ACCTCGTGCC CGTGTGCATC ATCTCCGGCG GCCGGTACGA GCAGTTCGAG
ATGCAGGTCG TCCGCCGGCT CGACGCGCCC GCGCAGTCGC TCGCGCGCCT TCACCTCATG
CCGACGTGCG GCACGCAGTA CTACCGGTAC GCGCCCGGGG CCGGGGACTT CGAGCAGGTC
TACGCGCACA CGCTGACCGC CGACGAACGC GACCGGGCGC TCGCCGCGCT CGAGGGCGAG
GCGAAGCGGC TCGAGCTCTG GGAGGCACGG ACCTGGGGCC CGATCCTCGA GGACCGCGGC
ACGCAGATCA CGTTCTCGGC GCTCGGGCAG CAGGCGCCCG TCGACGCCAA GGCGGCGTGG
GACCCGACGG GGGAGCGAAA GGAGCGGCTG CGCCACGCCG TCGCCGCCCT GCTGCCCGAT
CTTGAGGTCC GCTCGGGCGG CTCGACCTCG GTCGACATCA CGCGGCAGGG GATCGACAAG
GCGTACGGGA TGCGCGCGCT CACCGAGCTC GCAGGAGTCG GCCTCGCCGA GATGTTCTTC
ATCGGTGACC GCCTCGACCC GGGCGGCAAC GACCGGCCGG TGCTCGACCT GGGGGTCGCC
TGTCACGCCG TCGAGGGCTG GGAGGAGACG GCGGAGTACC TCTCCGGCAC GCTGCTGCCC
GAGCTGCGCC GTCGTGCAGA GGCGATGACG CCGTCCTGA
 
Protein sequence
MTTPDTDALP SRIGLVAFDL DDTLAPSKTA IDPVMSALLG ELLDLVPVCI ISGGRYEQFE 
MQVVRRLDAP AQSLARLHLM PTCGTQYYRY APGAGDFEQV YAHTLTADER DRALAALEGE
AKRLELWEAR TWGPILEDRG TQITFSALGQ QAPVDAKAAW DPTGERKERL RHAVAALLPD
LEVRSGGSTS VDITRQGIDK AYGMRALTEL AGVGLAEMFF IGDRLDPGGN DRPVLDLGVA
CHAVEGWEET AEYLSGTLLP ELRRRAEAMT PS