Gene Bcav_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1658 
Symbol 
ID7859600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1900253 
End bp1901470 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content73% 
IMG OID643865746 
Productoxidoreductase domain protein 
Protein accessionYP_002881676 
Protein GI229820150 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.526609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.191538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACG TGGGTGCGAA GGTGCTGAAG CTTGGGGTCG TCGGAGTCGG TGCGCGGGCC 
TCGCTCGCGC AGCATGCGGC GGCGGCCGGC GGGCGGGTGG TCGTCGCCGC GGATCCCGCC
GCCGCGGGGC GCGCGCGGGC GCGCGAGCTC TTCGGGGACG ACGTCGCGGT GGTCGCCGAC
CACCGCGAGC TCCTCGACGC CGGCCTCGAC GGGGTGTTCG TGCTGAGCCC GGACGACACC
CACGCGCGCA TCGCCGTCGA CCTGCTCGAC GCCGGGATCG CCGTCTACCT CGAGAAGCCG
ATGGCCACGA CGCTCGAGGA CTGCGACGCC ATCCTCCGCG CCCAGGCGAG GTCGGGAGCG
CTCCTCGTGC CGGGGCACAA CATGCGGCAC ATGCCCGTCG TCACCACCAT GAAGCAGCTC
ATCGACGACG GCGCGATCGG TGACGTGCAG GCGGTCTGGT GCCGGCACTT CGTCGGGCAC
GGCGGGGACT ACTACTTCAA GGACTGGCAC GCCGACGCCA GCCGGTCCAC GGGCCTGCTT
CTGCAGAAGG GCGCGCACGA CATCGACGTC ATCCACTGGC TCGCCGGCGC GCACACCGAC
GTCGTCGTCG GCATGGGGGC GCTGCAGGTC TACGGCGGGA TCGACGACCG GCGGGACAAC
TCCGACCGCC GCCTGCGCGA GTGGTTCTCG ACGAGCAACT GGCCGCCCAC CGCCCAGCGC
GAGCTGCACC CCGTCGTCGA CGTGGAGGAC ACGTCCATGA TCCAGATGCA CCTCACGAAC
GGCGTCCTCG CCAGCTACAC GCAGTGCCAC TTCACGCCCG ACTACTGGCG CAACTACACG
GTCATCGGCA CCGCCGGACG GCTGGAGAAC TTCGGCGACA CCTCGGGCGC CGAGATCCGC
GTCTGGAACC GGCGGCACGA CTATGACGCT GACGGCGACA CGCGCGTGCG GGTCGCGGAG
CCGGACGGCG GTGCTGCCGG GCACGGCGGG GCCGACGCGT CGATCGTCGC GGAGTTCTGC
GCCGCCGTGC GCGGGGAGCA GACGCCGCGC ACCACGCCGC TCGACGCCCG CGCCGCCGTC
GCGGCCGGGA CGTGCGGGAC GGCCTCGATC CGCGGCGGCT CGGTGCCCGT GCCGATCCCG
CCCCCCGACC TCGGTCCAGG TGCGCAGCTC GACGACGCCC CGAACCGCAG ACACACCGAC
AAGAAGGAGT CCGCGTGA
 
Protein sequence
MTHVGAKVLK LGVVGVGARA SLAQHAAAAG GRVVVAADPA AAGRARAREL FGDDVAVVAD 
HRELLDAGLD GVFVLSPDDT HARIAVDLLD AGIAVYLEKP MATTLEDCDA ILRAQARSGA
LLVPGHNMRH MPVVTTMKQL IDDGAIGDVQ AVWCRHFVGH GGDYYFKDWH ADASRSTGLL
LQKGAHDIDV IHWLAGAHTD VVVGMGALQV YGGIDDRRDN SDRRLREWFS TSNWPPTAQR
ELHPVVDVED TSMIQMHLTN GVLASYTQCH FTPDYWRNYT VIGTAGRLEN FGDTSGAEIR
VWNRRHDYDA DGDTRVRVAE PDGGAAGHGG ADASIVAEFC AAVRGEQTPR TTPLDARAAV
AAGTCGTASI RGGSVPVPIP PPDLGPGAQL DDAPNRRHTD KKESA