Gene Bcav_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1639 
Symbol 
ID7858836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1885705 
End bp1886433 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID643865727 
ProductMethyltransferase type 11 
Protein accessionYP_002881657 
Protein GI229820131 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.197359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCC CGTTCGACGA CTGGGTCGCG GACAACTACG AGCGGTTGTG GCCCGAGCTG 
TTCGTCCCGT CCGCGATCGA CGACGTCGTC GACGTGCTGG AAGCGTTGGC GGCCGGTCGG
CCGGCGCTGG AGCTCGGGAT CGGGACCGGA CGGATCGCCG TGCCGCTCGC CCTGCGGGGC
GTCGAGGTCC ACGGCATCGA GCTGTCGCCA CCCATGGCTC GCCGGGTGCT GGAGCAACCG
GAGGGGGAGC GGATCGCGGT CACGATCGGG GATCTTGCGC ACGTCTCGGC GGGATCCTCG
TTCGGCCTGG TGTACGTCGT CCGCAACACC ATCACCAACC TGACCACCCA GGACGCGCAG
GTCGCGGCGT TCGCCAACGC TGCGGCGCAC CTGGAGGCCG GTGGCGTCCT CGTCGTCGAG
AACTACGTCC CGGAGCTCCG GCGCCTCCCA CCGGACGAGA ACGTGCACGT CTTCGCGGCC
ACACCCACCC ACGTCGGCTA CGAGGAGTAC GACGTGGCTG CCCAGATCGC CGTCTCGCAT
CACACGTGGG TGATCGACGG CCAGGTCCGG TCGTTGGCCT CGACCCACCG GTTCGTGTGG
CCCGCCGAGC TCGACCTCAT GGCGCGAATG GCCGGCCTGG CGCTCCGCGA GCGATGGGCG
GACTGGACGG GCACGGCCTT CACGAGCGAG AGCCGGAGCC ACGTGAGCGT GTGGGAGAAG
ACCGCGTAG
 
Protein sequence
MTVPFDDWVA DNYERLWPEL FVPSAIDDVV DVLEALAAGR PALELGIGTG RIAVPLALRG 
VEVHGIELSP PMARRVLEQP EGERIAVTIG DLAHVSAGSS FGLVYVVRNT ITNLTTQDAQ
VAAFANAAAH LEAGGVLVVE NYVPELRRLP PDENVHVFAA TPTHVGYEEY DVAAQIAVSH
HTWVIDGQVR SLASTHRFVW PAELDLMARM AGLALRERWA DWTGTAFTSE SRSHVSVWEK
TA