Gene Bcav_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1627 
Symbol 
ID7858823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand+ 
Start bp1872674 
End bp1873300 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content75% 
IMG OID643865714 
ProductKDPG and KHG aldolase 
Protein accessionYP_002881645 
Protein GI229820119 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.108957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.378475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC ACGAGAGCGG AACCACGCCG GACATCGGCA CGATCATGTC GGCCAGCCCG 
GTGATGGCCC TGTTCCGGGG GATGGACGCC GCGCCGGCGG TCGAGCTCGC GCAGCGCGCG 
TGGGACGTCG GCATCGCGCT CGTCGAGGTA CCGATCCAGG AGGAGCGGTA CCTGCCCGCG 
CTCGAGGCCG TCGTCGCCGC CGGCCGCGAG CGCGGCCTGC TGGTCGGGGC CGGCACCATC 
ACGACGAGCG ACCGGGTCGA CGCTGTCGCG CGGGCCGGAG CGGCGTTCAC CATCGCCCCC 
GGCCTGGACC CCGACGTCGT CGCCGCGTCT CGTGCGGCGG GCCTGCCACA CCTGCCTGGG 
GTCGCGACCG CGAGCGAGAT CCAGCGCGCC GTCGCGCTCG GATGCACATG GGTGAAGGCC 
TTCCCGGCCT CGCTGCTCAC GCCGTCGTGG TTCCGGGCGA TGCACGGGCC GTTCCCGCAG 
GTGCGGTTCG TGGCGACCGG GGGCATCGAC GCCTCGAACG CCGAGGAGTT CCTCGACGGC 
GGCGCGAGCA CCGTGGCCGT CGGGTCGGCG CTCGCGGACC GGTCGCAGGT GGACCGCCTC 
GCCGACGTCA TCGCCCGGCG TAGCTGA
 
Protein sequence
MSTHESGTTP DIGTIMSASP VMALFRGMDA APAVELAQRA WDVGIALVEV PIQEERYLPA 
LEAVVAAGRE RGLLVGAGTI TTSDRVDAVA RAGAAFTIAP GLDPDVVAAS RAAGLPHLPG 
VATASEIQRA VALGCTWVKA FPASLLTPSW FRAMHGPFPQ VRFVATGGID ASNAEEFLDG 
GASTVAVGSA LADRSQVDRL ADVIARRS