Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1618 |
Symbol | |
ID | 7858814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1862225 |
End bp | 1865059 |
Gene Length | 2835 bp |
Protein Length | 944 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643865705 |
Product | ribonuclease, Rne/Rng family |
Protein accession | YP_002881636 |
Protein GI | 229820110 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.127332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.810349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGAGC CCACGAACGA AGCGCCCACC AACGACGAGC CCACCGAGGC CGCACCGGCG CCACGCCGCC GCGGCCCGCG GCGCGCCAGC CGGGGGGTGA CGACGCCCGT GGCGCCGGAC CCCGCCGTCG AGGCCGCCGC ACCGGAGCCT GAGCCTGAGC CGGCCCCCGT GCCCGCCCCC GAGCCCGAGG CGCCGCCCGA GCCCTCCGCC GAGCCGGCCG ACGCCGAGGT GCCGGTCGAG GACGACGCAC CGCCCTCCCG CGCGACGTTC TCGCACGCGG CACCGCCGGC ACCCGAGCGC GACGCCGACC AGAGGCTCGA CGTGTTCGCC GCCTTCGGCA TCGGCGCGCA GGCGGCGACG CCCGAGCCCG CCGCGGCCGA CGAGGTCGTG CCTGCGCCCG AGCCCGCCGC GGCGGACGAG GACGACGAAG AGCTGCCCGA GGGGGCCGAG GACGCCGAGG ACGGACCCCG TCTGCCGGCT ACCGCGCTGC TGTTCCAGGC GCCCGAGCCG CGGGCACGCT CCCGGCGTCG GGCGTCGTCG CCGGCCGGGC CGCCGAGCCC CGAGGATGCC GGCGAGCGAC CGGCCTCCCC GGAGCACGTC GACGCGCCCT CTGAGGCGGC GGCGTCCGAC GCCCCGGAGG CGGCCGAGCG TCCGAAGCGA CGCAAGCGCA GGAAGTCGGG CGGCTCGGCC GAGCCCGAGG CCCCGGAGAA GACCGAGGAC GCCGAGCAGG CGGCCACCGC CGCGCCGGAC GAGGACGAGC CGGCCGACGG CGATGCCGCC GAGGCCGGCG CCGAGGGCGA GGGCCGCCGT CGTCGTCGCC GCGGAGGGCG GGGCCGCAAG AAGGCGGCGG CCACCGACGC CGAGGACGAG CCTGCGTCCG CTGCGCCGGA CGAGGCGCCG GAGGCGGAGC CGGACGCCGA GTCCACGTCG CGACGTCGCC GCCGGCGGCG TTCCGGGCGC GCCGACGACG GCGCCCGCGC ACGCGACGAG GTGACGGCGC TCAAGGGGTC GACGCGGCTC GAGGCGAAGC GCCAGCGACG CCGCGAGGGG CGCGACGCCG GACGCCGTCG GACCATCATC ACGGAGGCGG AGTTCCTCGC CCGCCGCGAG GCCGTCGAAC GCGCGATGGT CGTGCGGGAG CGCGACGGCC GCACGCAGAT CGCCGTGCTC GAGGACGGCG TGCTCGTGGA GCACTACGTC GCCCGCAAGC AGCAGTCCTC GATGGTCGGC AACGTGTACC TGGGCCGCGT GCAGAACGTG CTGCCGAGCA TGGAGGCGGC GTTCGTCGAC CTCGGCAAGG GACGCAACGC GGTGCTGTAC GCCGGTGAGG TGAACTGGGA CGCCGCCGGG CTCGAGGGGC AGCCGCGCCG GATCGAGCAG GCGCTGTCGT CCGGCGACTC GGTGCTCGTG CAGGTGACGA AGGACCCGAT CGGCCACAAG GGCGCGCGAC TCACCTCGCA GATCACGCTC GCCGGGCGCT ACCTCGTGCT CGTGCCGAGC GGGGCGATGA CGGGGATCTC GCGCAAGCTC CCCGACACCG AGCGCGCCCG CCTGAAGAAG CTCCTCAAGG AGATCGTCCC CGACGGGCAG GGCGTCATCG TGCGCACGGC CGCGGAAGGG GCGAGCGAGG ACGAGCTGCG CCGCGACGTC GAACGCCTGA CCAAGCAGTG GGCGGACATC CAGACGAAGG TCAACGGCTC CGGTGGCACC GGCCGCAAGC CCCAGAAGGT GACGGCGCCT GCCCTGCTGA AGGGCGAGCC GGAGCTCGCG CTGCGCGTCG TCCGTGACGT GTTCAACGAG GACTTCTCCT CGCTCACGGT GTCCGGCGAC GAGGCCTGGC ACACGATCTC CGACTACCTC ACGACCGTCG CGCCCGACCT CGCCCAGCGG CTGACCCACT GGACCGACGA CGCGGACGTG TTCGCGCGGT TCCGGATCGA CGAGCAGCTC GCCAAGGGGC TCGACCGCAA GGTCTGGCTC CCGTCCGGCG GCTCGCTCGT CATCGACCGC ACCGAGGCGA TGACCGTCGT CGACGTCAAC ACCGGGAAGT TCACCGGCTC GGGCGGCACG CTCGAGGAGA CCGTCACCCG GAACAACCTC GAGGCCGCCG AGGAGATCGT CCGGCAGCTG AGGCTGCGGG ACATCGGCGG GATCATCGTC ATCGACTTCA TCGACATGGT CCTCGAGTCC AACCGCGACC TCGTGCTGCG GCGGCTCATC GAGTGCCTCG GCCGGGACCG CACGCGGCAC CAGGTCGCCG AGGTGACCTC CCTCGGTCTC GTCCAGATGA CGCGCAAGCG CGTCGGGCAG GGCCTCGTCG AGGCGTTCAG CGAGACGTGC GAGCACTGCC ACGGACGAGG CTTCGTGGTG CACACCGAGC CGTTCGAGGC GCAGCCCGTG GCGGAGGAGG AGACGCCGCG CGTCGGCCGG CGTCGCGGGT CCCGCTCGCG CGGTGCGGCG CAGCCCGCGC AGCCGGCGGA GGACGACGCC TCGGCGGCCG CCCGCGAGGC GGTGCGCGCG ACGCTCGCGA CCATCGCGGC CGCCGCGCAG CACGCGCACG AGAGCACCGA TCGGCCCGAG GGCGACGACG GCGCGACGCC GTCCGCGGAC GTGACGCCCG CCGAGGTCGA CGAGGTCCAG CTGGTCGCCG TGGAGTCCGA GGTAGAGCCG GAGCCGGAGT CGCAGGCCGA GGCGGAGCCT CAGTCCGAGC CCGAGGTGGA GCCAGAGCCG GAGCCTCAGG CAGCGACCGA GGCGGACGGC GCAGCGCAGG ACGAGCAGCA GCCGGCCGAC GTCGCCGCGG ACCCGGGCGA GGAGACCGAA CCCAGCGACG CGTGA
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Protein sequence | MSEPTNEAPT NDEPTEAAPA PRRRGPRRAS RGVTTPVAPD PAVEAAAPEP EPEPAPVPAP EPEAPPEPSA EPADAEVPVE DDAPPSRATF SHAAPPAPER DADQRLDVFA AFGIGAQAAT PEPAAADEVV PAPEPAAADE DDEELPEGAE DAEDGPRLPA TALLFQAPEP RARSRRRASS PAGPPSPEDA GERPASPEHV DAPSEAAASD APEAAERPKR RKRRKSGGSA EPEAPEKTED AEQAATAAPD EDEPADGDAA EAGAEGEGRR RRRRGGRGRK KAAATDAEDE PASAAPDEAP EAEPDAESTS RRRRRRRSGR ADDGARARDE VTALKGSTRL EAKRQRRREG RDAGRRRTII TEAEFLARRE AVERAMVVRE RDGRTQIAVL EDGVLVEHYV ARKQQSSMVG NVYLGRVQNV LPSMEAAFVD LGKGRNAVLY AGEVNWDAAG LEGQPRRIEQ ALSSGDSVLV QVTKDPIGHK GARLTSQITL AGRYLVLVPS GAMTGISRKL PDTERARLKK LLKEIVPDGQ GVIVRTAAEG ASEDELRRDV ERLTKQWADI QTKVNGSGGT GRKPQKVTAP ALLKGEPELA LRVVRDVFNE DFSSLTVSGD EAWHTISDYL TTVAPDLAQR LTHWTDDADV FARFRIDEQL AKGLDRKVWL PSGGSLVIDR TEAMTVVDVN TGKFTGSGGT LEETVTRNNL EAAEEIVRQL RLRDIGGIIV IDFIDMVLES NRDLVLRRLI ECLGRDRTRH QVAEVTSLGL VQMTRKRVGQ GLVEAFSETC EHCHGRGFVV HTEPFEAQPV AEEETPRVGR RRGSRSRGAA QPAQPAEDDA SAAAREAVRA TLATIAAAAQ HAHESTDRPE GDDGATPSAD VTPAEVDEVQ LVAVESEVEP EPESQAEAEP QSEPEVEPEP EPQAATEADG AAQDEQQPAD VAADPGEETE PSDA
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