| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1613 |
|---|
| Symbol | |
|---|
| ID | 7858809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 1854294 |
|---|
| End bp | 1855946 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643865700 |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002881631 |
|---|
| Protein GI | 229820105 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTGGA TGGCCTCGTC GACGCTCCTC ACCCACGCCC TCGCGCTCGC GGGGCAGCTC
GACGCGCCCA GCGCGCTCGA GGAGCTCCTG GCGGCGGCCC GGACGCACAC GGGCGCGACC
TACGCGGCGA TCGCCGTCCT CGACCCGTAC GGCGAGACGA ACACGTTCAT GCACCGCGGG
ATGAGCAGCG AGGTGGTCGC CGCTCTCCCG CACCCTCCCC GCGGCCACGG GGTGCTCTCC
GCGATCCCGG CGGACGGCGT CCTCGTGCTC GACGACCTCA CGGCCGCCCC GGAGTTCGAG
GGCTTCCCGG CCGGTCATCC GCCGATGCGC ACGTTCCTCG GCGCGTCGGT GAGCGTCGGG
GACGTGCTGC TCGGCCGGCT GTACCTGACG GAGAAGCCCG GCGGCTTCAC CGACGAGGAT
GTCGAGACGG TCGAGCTGCT CGCCGCGGCG GCCGGGATCG CGATCGAGAA CGCCCGCTTG
TACGGCGAGG CGGCGCGGCG CGAACGCTGG CGCTCGGTGT CCCAGGAGAT CACCGCCGCG
CTCCTCGAGG GGTCCGACGA GGAGGAGGTG CTGCCGCTCG TGGCGCGCCG GCTGCGCGAG
GCCGCCGACG CCGACACCGC GGTCATCGTC CTGCCCTCCC TCGACGGCGC CTGGGTGGCC
GAGATCGTCG ACGGCGTGGG CGCGGCCGAC CTCGTGGGGT CGGCGTTGCC CCCGTCCGGT
CCCGCGATGG AGACCCTCCG GACGGGCGCG GGCAAGCTCG TCGACTCCAT CTCGCGCGAG
GCCGACCGGT TCATCCCGCA GGCGCGCCGG TTCGAGCGCG CCCTGTACGC GCCCCTGCGC
GCGTCCCGCG CCGACGACGA CGCACCCAGC CTCGGCGTCC TCATCCTGTT CCGGCTGCCC
GGCCGGCTCC CGTTCACCGG TGGCGACCTC GCCATCGCCG AGGACGTCGC CGCCCAGGCC
GCTCTGGCGC TGCGGCTCGC CGCGGCCCGC CACGCCGAGG ACGTCGCGAC GCTGCTCGGC
GAGCGGGCTC GCATCGCCCG CGACCTGCAC GACCTCGCGA TCCAGCAGCT GTTCGCCACC
GGCATGCGGC TCGAACGCGC GGCGACGACC GCCGCGGCGG CGGAGCGCGC GCTCATCGAG
GAGTCGATCG CGGACGTCGA CGAGAGCGTC CGCCAGATCC GCGGCATCGT GCGGTCCCTG
CGCGACCGGG ACGAGCACCT TCCGGTGGTC GAACGGCTGG TGCAGGAGGC GTCGATCGCG
CGGACGGCGC TCGGGTTCGC GCCGTCGATG CTGCTCACCC TGGACGGCGC ACCGATGCAC
GACGTCGAGC CGCGGGGCGA CGCGGCCACG GAGATCGCGG CCCGCCTCGG CGAGCAGGCC
GCCGACGACG TCGTCGCCGT CGTGCGCGAG GGCCTCGCCA ACGTCGCCCG TCACGCGCGT
GCGACGAGCG CGCAGGTCGA GGTCGCCGTC GAGCCGCGCC AGGTCCGTGT CGTCGTCACC
GACGACGGCG TGGGTCCCGA CCCCGACCCG GAGCGTCGAT CCGGGCTCGC GAACCTCGAG
GCTCGGGCCC GCGACGCGCA CGGCTCCTCC CGGCTGACGC CGGGCCCCGG GGGCCGCGGC
AGCGTCCTGC GGTGGGCGGC CCTGCTCGAC TAG
|
|---|
| Protein sequence | MTWMASSTLL THALALAGQL DAPSALEELL AAARTHTGAT YAAIAVLDPY GETNTFMHRG
MSSEVVAALP HPPRGHGVLS AIPADGVLVL DDLTAAPEFE GFPAGHPPMR TFLGASVSVG
DVLLGRLYLT EKPGGFTDED VETVELLAAA AGIAIENARL YGEAARRERW RSVSQEITAA
LLEGSDEEEV LPLVARRLRE AADADTAVIV LPSLDGAWVA EIVDGVGAAD LVGSALPPSG
PAMETLRTGA GKLVDSISRE ADRFIPQARR FERALYAPLR ASRADDDAPS LGVLILFRLP
GRLPFTGGDL AIAEDVAAQA ALALRLAAAR HAEDVATLLG ERARIARDLH DLAIQQLFAT
GMRLERAATT AAAAERALIE ESIADVDESV RQIRGIVRSL RDRDEHLPVV ERLVQEASIA
RTALGFAPSM LLTLDGAPMH DVEPRGDAAT EIAARLGEQA ADDVVAVVRE GLANVARHAR
ATSAQVEVAV EPRQVRVVVT DDGVGPDPDP ERRSGLANLE ARARDAHGSS RLTPGPGGRG
SVLRWAALLD
|
|---|
| |