Gene Bcav_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1607 
Symbol 
ID7858803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1850179 
End bp1850757 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content74% 
IMG OID643865694 
Productprotein of unknown function DUF177 
Protein accessionYP_002881625 
Protein GI229820099 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0562637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.911119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACGC GTTCCCCGCT CGTCCTGAGC ACGCACGACC TCGGTCGGCG CGCCGGGTCG 
ATGCGGACCT ACGACCTCGA CGTCCCCGCG CCCGACGCGC TGGCGATCGA GGTCGTCGGC
GTGCCCGCGG GCTCGTCCAT GCACCTCGAG CTGCGGCTCG AGTCGGTGAT GGACGGCATC
CTCGTCACCG GGTCCGCCGA CGTCGCCCTC GCCGGCGAGT GCGTCCGCTG CCTCACGGCC
GTCACGGATG AGCTCACCGT GCCGTTCCAG GAGCTCGTCT ACTACTCCGA CGTGCGGGAC
GCGCGCCGCA GGCAGGACGA CGACGCCGAG GGCGAGCAGG TCGAGCGGTA CGTGCTCACC
GGGGAGCTGC TCGACCTCGA GCAGATGGTC CGGGACGCCG TCGTGCTCGC CCTGCCGTTC
CAGCCCCTGT GCCGGCCCGA CTGCCCGGGC CTGTGCCCGG TGTGCGGGAT CCGGCTCGCC
GAGGCCGGCC CCGACCACGC GCACGACGAG ACGGATCCAC GCTGGGCGGC GCTCGTCGGC
CTGCTCGAGG ACTCCGGCGA GAGCCCCACC ACCACCTGA
 
Protein sequence
MDTRSPLVLS THDLGRRAGS MRTYDLDVPA PDALAIEVVG VPAGSSMHLE LRLESVMDGI 
LVTGSADVAL AGECVRCLTA VTDELTVPFQ ELVYYSDVRD ARRRQDDDAE GEQVERYVLT
GELLDLEQMV RDAVVLALPF QPLCRPDCPG LCPVCGIRLA EAGPDHAHDE TDPRWAALVG
LLEDSGESPT TT