Gene Bcav_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1601 
Symbol 
ID7858797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1844454 
End bp1845170 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content76% 
IMG OID643865688 
ProductABC transporter related 
Protein accessionYP_002881619 
Protein GI229820093 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.122919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTAGCA AGACCAGAGC GCCACGCTCC ACCGCCGTCC TGCGCGCCTC GGGCGTTCTC 
GTCGGCTACG GCGCCGGCCG CGAGTCCGCC GTCTGCCCCC CGATCGACGT GACGCTGAAC
GCCGGCAAGG CGCTCGCCGT CGTCGGCGCG AACGGGACCG GGAAGTCGAC GTTCCTGCGG
GCCGCGATCG GGCTCCTCGA ACCGTTCGCC GGCTCGATCG AGGTGCTCGG GGCGCCCGTC
GACGAGCGCG ACGCCGCCTT CCGCGCGGGC GTCGCGAGCG TCCTCGACGA CGACGCGTAC
TTCCCCGCGC TGACCGTGCG CGAGCACCTG CTCCTCGTGG CGCGCGGGCA CGGCGTGCAG
GGGGCGAGCG CGCTCGTCAC CGAGCTCGTC GAGGAGTTCG GGCTGACGGA CCGGGCCAAG
GCGATCCCGA CGGCGCTCTC CTCCGGGCAG CGGCGCCGGC TGCTGCTCGC CGCCGGGCTC
GTGCGGCCGC GGAAGCTCCT CGTCCTCGAC GAGCCGGAGC AGCGGCTCGA CGTCGGCATG
CGCGACCGGC TCGCCGAGCG GCTGACGGCG GAGTGCGCAG CGGGCGGGTC CGTGCTCATG
GCCACGCACG ACCCGGTGCT CGTGCGCAGC GTCGCCCACT CCGCGCTGCT CATCGCCGAG
GACGCCGTCC GCCGGATCTC GCCCGACGAG GCCGCGCGCG CGATCGAGGC GCTGTGA
 
Protein sequence
MPSKTRAPRS TAVLRASGVL VGYGAGRESA VCPPIDVTLN AGKALAVVGA NGTGKSTFLR 
AAIGLLEPFA GSIEVLGAPV DERDAAFRAG VASVLDDDAY FPALTVREHL LLVARGHGVQ
GASALVTELV EEFGLTDRAK AIPTALSSGQ RRRLLLAAGL VRPRKLLVLD EPEQRLDVGM
RDRLAERLTA ECAAGGSVLM ATHDPVLVRS VAHSALLIAE DAVRRISPDE AARAIEAL