| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1595 |
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| Symbol | ddl |
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| ID | 7860361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1838515 |
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| End bp | 1839633 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643865682 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_002881613 |
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| Protein GI | 229820087 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0878073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCACC AGAGGATCCG CGTCGCCATC GTGTTCGGCG GGCGCAGCGG AGAGCACGCC
GTCAGCGCCG CGACCGCCGC CGGCGTGCTG GGCGCGATCG ACCGCGGGAA GTACGACGTC
GTCCCGGTCG GGATCACCAG GTCGGGAGAG TGGGTGCTCG CCGCCGACGA CGCCGGTGCG
CTCGAGATCC GGGACGGGCA CGTCCCGGAG GTGGACGCCA CGGGCGACGG GCGCCTCCTC
GTGCCGTTCG GGTCCGGCCC GGCGCAGCTC GTCGTGCTCT CACCGGGCGC CCCGCCGAAC
GAGCTGGCCG GCGTCGACGT CGTCCTCCCG CTCCTGCACG GCCCGTTCGG TGAGGACGGC
ACCATCCAGG GGATGCTCGA GCTGGCCGGC GTGCCGTACG TCGGGTCGGG CGTGCTCGCG
TCCGCGGCGG GGATGGACAA GCACTACATG AAGGTCGTGC TGGCTGGTGC GGGCCTGCCG
GTCGGGCCCT ACACCGTCCT CACCCCGAGC GCGTGGCGCC GCGATCGTGC CGCGTGCCTC
GACCAGGTCG CCTCGCTCGG CCTGCCGGTC TTCGTCAAGC CCGCCCGCGC CGGCTCGAGC
ATCGGGATCA CCCGCGTCGA GAGCCTCGAC CGCCTGGTCG AGGCGATCGA GGAGGCGCAG
CGGCACGACC CGAAGGTGAT CGTCGAGGCG GCGATCACGG GCCGCGAGAT CGAGGTCGCC
GTCCTGGAGG GCCGCGGCGA CGAGCCGCCG CGCACCACGA TGCCGGGGGA GATCGTCGTC
ACCAACGCCG AGCACGGGTT CTACGACTAC GAGGCCAAGT ACTTCGACTC CGCCGGCGTG
GACCTGCGCT GCCCGGCGGA CCTCCCGCCC GGCGTCGCGG ACGAGGCACG CCGCCTGGCG
GCGGAGGCGT TCGACGCGCT CGGCTGCGAG GGTCTGGCGC GCGTCGACTT CTTTTACACG
CCGTCGGGCA CGCTCGTCGT CAACGAGATC AACACGATGC CCGGGTTCAC GCCGTTCTCG
ATGTTCCCGC TGCTGTGGGA ACGTTCGGGC GTCGCCTACC CGGAGCTCAT CGACGAGCTG
CTCCAGCTCG CCCTCGCCCG GCCCACCGGA CTGCGCTGA
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| Protein sequence | MSHQRIRVAI VFGGRSGEHA VSAATAAGVL GAIDRGKYDV VPVGITRSGE WVLAADDAGA
LEIRDGHVPE VDATGDGRLL VPFGSGPAQL VVLSPGAPPN ELAGVDVVLP LLHGPFGEDG
TIQGMLELAG VPYVGSGVLA SAAGMDKHYM KVVLAGAGLP VGPYTVLTPS AWRRDRAACL
DQVASLGLPV FVKPARAGSS IGITRVESLD RLVEAIEEAQ RHDPKVIVEA AITGREIEVA
VLEGRGDEPP RTTMPGEIVV TNAEHGFYDY EAKYFDSAGV DLRCPADLPP GVADEARRLA
AEAFDALGCE GLARVDFFYT PSGTLVVNEI NTMPGFTPFS MFPLLWERSG VAYPELIDEL
LQLALARPTG LR
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