Gene Bcav_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1594 
Symbol 
ID7859752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1837281 
End bp1838453 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content76% 
IMG OID643865681 
ProductCystathionine gamma-lyase 
Protein accessionYP_002881612 
Protein GI229820086 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.320611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCACC CGCACGGACT GCGCCCCGGC ACCCTGGTCG TCGCCGCCGG CCGACCCGAC 
CGCGTCGAGC AGGCGCCCGT GAACCCGCCG GTCGTGCTGT CCTCCACCTA CGTGGGCACC
GGAGCGCCGG ACGACGGCAA CCTCGTGTAC GCACGGATGG ACACGGAGAC GTGGCACGGC
CTGGAGGAGG CCATCGGCGA CCTGGAGGGC GCCGCGCACC CGGCGCTCGT GTTCGCCTCG
GGGATGGCGG CCGTCACGGC GGCGCTCGAC CTCGTGCCGC CGGGGACGAG GCTCGTGGTG
CCGAGCCGGG CCTACCACGC GACCCTCGTC GCGGCGCGGC ACGTGGCCGC GCGCTCCGGC
GTCGACGTGC GCGAGGTCGA CATGGGCGAC ACCGCGGCGA TCGTCGCGGC GATCGATGCC
GACGACGACG GTCCGGCCGC CTCGCTCGTG TGGCTCGAGA CGCCCACGAA CCCGACGCTC
GAGATCGCCG ACATCCGCGC CGTCAGCGAG GCGGCGCACG CGCGCGGGGC GCTCGTCGTC
GTCGACAACA CGTTCGCGAC GCCGCTGGCG CAGCGGCCGC TCGAGCTCGG GGCGGACGTC
GTCGTCCACT CGGTCACGAA GTACCTGGCC GGGCACTCCG ACGTGGTGCT CGGCGCGGCT
GTCACGAGCG ACGCCGAGCT GCGGTCCGTG CTGCACACCC GCCGGACGAT CGGAGGTGCG
ATCGCCGGAC CGTGGGAGGC GTGGCTCGCG CTGCGAGGGT TGCGCACGCT CGCGCTGCGG
GTCGAGCGGT CGCAGGCGAA CGCGCTCGAG CTCGCTCGCC GGCTGCGGGA GCACCCCGAC
GTCCTCGCCG TCAGCCACCC GGGGCTGCCG GACCACCCGC AGCACGCCCT CGCCGCCGCC
CAGATGTCCG GATTCGGCTC GATCATCGCC CTGCGTCCGC GGGGTGGGGA GGCTGCGGCC
GACGGCGTGG CACGCTCCGT GGTGCTGTGG GTGCCGGCGA CCAGTCTCGG CGGGGTGGAG
TCGAGCCTGG AGCGACGACG CCGGTTCGCC TCGGAGGCGG CGACGGTCCC GGACGACCTG
CTGCGCCTGT CCGTCGGGAT CGAGGACGTC GAGGACCTGT GGCGCGACCT CGACGCGGCG
TTGCGGCGCG CGACGGGCGC GGCGCGCTCC TAG
 
Protein sequence
MSHPHGLRPG TLVVAAGRPD RVEQAPVNPP VVLSSTYVGT GAPDDGNLVY ARMDTETWHG 
LEEAIGDLEG AAHPALVFAS GMAAVTAALD LVPPGTRLVV PSRAYHATLV AARHVAARSG
VDVREVDMGD TAAIVAAIDA DDDGPAASLV WLETPTNPTL EIADIRAVSE AAHARGALVV
VDNTFATPLA QRPLELGADV VVHSVTKYLA GHSDVVLGAA VTSDAELRSV LHTRRTIGGA
IAGPWEAWLA LRGLRTLALR VERSQANALE LARRLREHPD VLAVSHPGLP DHPQHALAAA
QMSGFGSIIA LRPRGGEAAA DGVARSVVLW VPATSLGGVE SSLERRRRFA SEAATVPDDL
LRLSVGIEDV EDLWRDLDAA LRRATGAARS