Gene Bcav_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1587 
Symbol 
ID7859745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1828592 
End bp1829911 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content74% 
IMG OID643865674 
Producthistidine kinase 
Protein accessionYP_002881605 
Protein GI229820079 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.230024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCG GCGTCGGCGC GGGGCCCGTC ACCGGCGACG AGCCCCGCAC CCGGGCGCCG 
TGGCAGGCTG GCGGCATGAG GTCTCCGTGG TCGTCACGCC TGCTGAGAGG CGGCGCGCAC
GGCGTCGAGA TCTACACCCG CGTCTCGCTG TACGCGATCG CGTTCATCGA GCTGATGCTG
CTGCTCGTCC CGGCGGCGGT GCTCGCGGAG ACCTCGGAGG GGCTCGCGCT GGCGTTCGGC
CTGGCCGTTC TCGTGCACGT CGCGCTGTGC GTGACGGTGC TGCGCGACGG ACTCGACCGG
CGTCCGGCCT CCGCCCGCGG TGTGCGGGCC GCCCTCGTCG CGCTCGGAGC GCTGAGCGTC
GGGTTGATCG TCCTGGCGTT CGTCGCGTTC CCCTCCGGCG ACCAGGCCTT GTTCCCCGAG
AATCCTCGCG CGACGACGGT CGTCGTGGTC GGTGCGTTCG CGCTGGGCGC CCTCGCGCCG
CGCCTCGACA TCCGCGCGCT GACGGTCGGC ATGCTGGGAG TCGCGGCCCT CGCCGTCGTC
GGTCAGCTCA CCTCGGACGA ACCCGGCGTC GCCGCAGTTC TGGGCCTCGT GACCTTCCTC
GTCGGGTTCG GGTACGTCGC GAGCGTGCGG CTGTCGATCT GGATCCTCGA GGTCGTGCGT
GAGCTCGACG CCTCGCGGGA CACCGCTGCC CGTCTCGCCG TCGCCGAGGA ACGGTTGCGG
ATCTCCCGCG ACATGCACGA CGTCGTCGGC CGGGCGCTCT CGACCGTGGC GGTGAAGAGC
GAGCTGGCCG CCGAGCTCGC CCGCCGCGAC GACGCCGGTG CGGTGCGGGA GATGCTCGAC
GTGCGCACGC TGGCGCAGGA CTCCCTGCGG GAGGTGCGCG GCGTCGTCGC CGGCTACCGG
GCCGCCGATC TCGCGACCGA GCTCACCGGT GCACGATCGG TGCTGACGGC GGCGGGGATC
CGGACGCGGA TCATCGGCGA CGCGAGCGGC CTGGACCCGC GCACCCAGGA GGCCCTGGCC
TGGGTCGTGC GCGAGGCGGT GACGAACGTG GTCCGCCACG CGGACGCGCA GGAGTGCCGC
CTCGAGATCG CCACCGACGC CACGGGAACG CTCCTGCGCG TCGTCAACGA TGGAGCCAAG
CGGCCGGACC ATGCGTCCGG CGCGGGCCTG CGTGGCCTGA CCGAGCGGCT CGCGGAGCTG
GGCGGAACCG TCACGACCTC CTGCGACGGC GACACGTTTG TCCTCGAGGC GCGCCTGCCG
CGCCCGCCGG GAGAGGACGA TCGCCACACC GGGCGCGCCG ACACCGGGGC GCGCCGATGA
 
Protein sequence
MSGGVGAGPV TGDEPRTRAP WQAGGMRSPW SSRLLRGGAH GVEIYTRVSL YAIAFIELML 
LLVPAAVLAE TSEGLALAFG LAVLVHVALC VTVLRDGLDR RPASARGVRA ALVALGALSV
GLIVLAFVAF PSGDQALFPE NPRATTVVVV GAFALGALAP RLDIRALTVG MLGVAALAVV
GQLTSDEPGV AAVLGLVTFL VGFGYVASVR LSIWILEVVR ELDASRDTAA RLAVAEERLR
ISRDMHDVVG RALSTVAVKS ELAAELARRD DAGAVREMLD VRTLAQDSLR EVRGVVAGYR
AADLATELTG ARSVLTAAGI RTRIIGDASG LDPRTQEALA WVVREAVTNV VRHADAQECR
LEIATDATGT LLRVVNDGAK RPDHASGAGL RGLTERLAEL GGTVTTSCDG DTFVLEARLP
RPPGEDDRHT GRADTGARR