Gene Bcav_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1577 
Symbol 
ID7859735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1818957 
End bp1820129 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content71% 
IMG OID643865664 
Productoxidoreductase domain protein 
Protein accessionYP_002881595 
Protein GI229820069 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCA AGATCGGCAT CATCGGCTTC GGGCTGCGCT CTGGGCTCTG GCGCCACGCG 
CACCGCCCCG AGCAGGGCTT CGAGGTGGTG GCCGCCTGCG ACACCTCCGA GCGCGGCCGG
GCGGACGCCG TCGCCGCCCT GCCCGAGACA GCTCTCGTCA CCGCCGACCT CAAGGAGCTG
CTCGGTCTCG GTCTGGACGC CGTGCTGGTC ACGACGCCGG ACGACCAGCA CCACGGGCCC
ACCCTCGCGG CGCTCGAGGC GGGGGCCGCC GTGTTCTGCG AGAAGCCGCT CGGGATCACC
GTCGAGGAGT GCGACGAGAT GCTGGCCACC GCCCGGCGCA CCGGGAGCAG GCTCTACGTC
GGCCACAACA TGCGACACAT GCCCGTCGTG GCCCAGATGC GCCAGCTGAT CCACGACGGC
CGGATCGGGC AGGTCAAGGC GGTCTGGTGC CGCCACTTCG TGGGCCATGG CGGGGACTTC
TACTTCAAGG ACTGGCACGC CGACCGCAGC AGGACCACCG GACTCCTGCT GCAGAAGGGC
GCCCACGACC TCGACGTCAT CCACTGGTTG GCCGGCGGCT TCGCCACCAG CGTGGCCGCC
ATGGGCGACC TGATGGTCTA CGGCGGCATC ACCGACCGTC GGGATCGGAT GCAGGAGCGG
ATGGGCGAGT GGGTCAGCCT CGACAACTGG CCGCCCACCG CGCAGACAGG CCTGCATCCC
GTGGTGGACG TCGAGGACAT CTCGATGATG ACCATGCGGC TCGACAACGG CGTGCTGGCT
TCCTACCAGC AGTGCCACTT CACCCCCGAC TACTGGCGCA ACTACACGGT GATCGGCACC
GAGGGCCGGC TGGAGAACCT GGGCGACGGT CCGGGGGACA CGATCGGCCT GTGGAACCGC
CGGCACTCCG GCCACGCGGC GCCGGACGAG ACGTTCACCG TGCAGGCGGC CGACGGCGGG
CACGGTGGCG CCGATCCGCG GCTGATCACG GAGTTCCTGC GGTTCGTCAC CGAGGGCGGG
ACCACCCAGA CGTCGCCGGT CGCGGCACGC ATGTCGGTGG CCGCCGGGGT GGTGGCGACG
CAGTCGCTGC GCTCCGACGG CTCCGCCCGG CCGGTGCCGC CGCTGGCCCC GGACCTGATC
GACTACTTCG AGCGCGGACA GACGGAGGCC TGA
 
Protein sequence
MTVKIGIIGF GLRSGLWRHA HRPEQGFEVV AACDTSERGR ADAVAALPET ALVTADLKEL 
LGLGLDAVLV TTPDDQHHGP TLAALEAGAA VFCEKPLGIT VEECDEMLAT ARRTGSRLYV
GHNMRHMPVV AQMRQLIHDG RIGQVKAVWC RHFVGHGGDF YFKDWHADRS RTTGLLLQKG
AHDLDVIHWL AGGFATSVAA MGDLMVYGGI TDRRDRMQER MGEWVSLDNW PPTAQTGLHP
VVDVEDISMM TMRLDNGVLA SYQQCHFTPD YWRNYTVIGT EGRLENLGDG PGDTIGLWNR
RHSGHAAPDE TFTVQAADGG HGGADPRLIT EFLRFVTEGG TTQTSPVAAR MSVAAGVVAT
QSLRSDGSAR PVPPLAPDLI DYFERGQTEA