Gene Bcav_1574 details

Gene Information

• Locus tag: Bcav_1574
• Symbol: leuD
• ID: 7859732
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Beutenbergia cavernae DSM 12333
• Kingdom: Bacteria
• Replicon accession: NC_012669
• Strand: +
• Start bp: 1810472
• End bp: 1811110
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643865661
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_002881592
• Protein GI: 229820066
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAGAAGT TCACGACGCA CACGGGTGTC GGTGTGCCGC TGCGGCGCAG CAACGTCGAC 
ACCGACCAGA TCATCCCCGC CGTCTACCTC AAGCGGGTGA CCCGGACCGG GTTCGAGGAC 
GCGCTGTTCG CGGCGTGGCG CGGCAACGAG ACGTTCGTCC TCAACCAGCC CGCCTACACG 
CACGGGTCGG TGCTCGTCGC GGGCCCGGAC TTCGGCACCG GGTCCTCCCG CGAGCACGCC 
GTCTGGGCGC TCAAGGACTA CGGGTTCCGC GTGGTGATCG CGTCCCGGTT CGCCGACATC 
TTCCGCGGCA ACTCGGGCAA GCAGGGGCTG CTCGCGGCGC AGGTCGCGCA GGACGACGTC 
GAGCTCATCT GGAAGGTGCT CGAGAACTCC CCGGGCACCG AGGTGACCGT CGACCTCGCC 
GCCAAGCAGG TCACGGTCGC CGACATCGTC GCCCCGTTCC AGATCGACGA CTACACGCGG 
TGGCGCCTCC TGGAGGGCCT CGACGACATC GGCCTAACCC TCCAGCACGC CGACGAGATC 
ACGGCGTTCG AGGCCACGCG TGAGCCGTGG CGTCCGCTGA CGCTGCCCGC GAAGCACCTG 
CCCGCGGTGC CGATCACGGC GGCGCGCCCC GTCGCCTGA 

 

Protein sequence

MEKFTTHTGV GVPLRRSNVD TDQIIPAVYL KRVTRTGFED ALFAAWRGNE TFVLNQPAYT 
HGSVLVAGPD FGTGSSREHA VWALKDYGFR VVIASRFADI FRGNSGKQGL LAAQVAQDDV 
ELIWKVLENS PGTEVTVDLA AKQVTVADIV APFQIDDYTR WRLLEGLDDI GLTLQHADEI 
TAFEATREPW RPLTLPAKHL PAVPITAARP VA