Gene Bcav_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1558 
Symbol 
ID7859714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1787897 
End bp1791169 
Gene Length3273 bp 
Protein Length1090 aa 
Translation table11 
GC content78% 
IMG OID643865643 
Productprotein of unknown function DUF214 
Protein accessionYP_002881576 
Protein GI229820050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCACGA CGGCAGCACT GCTGCGCCGG CGCGCCCGCT CCCAGCTGGG CCTCCTCGCG 
CTGCTCGGCG TGCTCGTGGC TCTCGTGGCG GGCGTGGGCG CCGGTGCCCT CGGGTTCGTG
GTGGTCTCCG CGGAGGCCGG CTCCCGCCAG ACGATCGAGG AGGCACCGCC GACGGCGTCC
GGCGTGCAGG TCCAGACGCG GCTCGCCGAC GACGCCCCCG CGCAGGACGC CGCAGCTACC
GCCCGGATCG ACACGGAGAC GTCGGGGCTC CCCGCCGTCG TCGACCGCTC GATCCGCACG
GGACCGCTCG ACGTGCTCGC CGTCGCCGAG GAGGCCCCCG AGGTCGCGCA ACGCGTCGTC
GCCGGCGCCG ACGACGCCCT GGCCGAGCGG GCTCACCTCA CGGACGGCGC GTGGCCCGAG
CCGGTGACCG GCGAGGGCGC GGGTACCGAG GAGACGCCGC TCCAGGGCGT GCTGCACGCC
CTGGCTGCGG AGAGCCTCGG CGCCGGCGTC GGCGACGTGC TCGCCCTCGG CGGCGAGGAC
GCGGTGCACG TCGTCGTGGC CGGGCTGTGG GAGCCCGACG ACGGCGCCGA CCCGGCCTGG
TTCGGCGAGC GCGTCGTCGT GACGGGCTCG AGCCCCGCCG ACCGTGGCGC GCTCGGTCCG
CTCATGCTCC CGGAGTCCTC GCTCGCCGCC GTCCCGACGC AGCCCTTCGT CCGGTGGACG
GTCCGCGCTG ACGCGCAGCG CGTCGTGCCG GCTGATCTCG CCCCCCTCGC GCGGGCGCTC
GAACGCATCC CGGCCGCTCT CGACGACGAG CCCGGCGTCG TGCTCCGCGG TGCGACCACG
ACCGGGACGG GCGCCCAGGA GCTCGCCGCG ACCGCCGCCG CCCTGGGCGC GGTCCGCGGA
ACGGTCGCCG TGCCGCTGCT CGTCCTCGCT GTCGTGTCGG CCCTCGCCAT CTGGCAGATC
GTCGGGTTGC TCGTGACGGT CCGCTCCACC GAGACGGACC TGCTCACCGC GCGCGGTGCC
ACCCGCGGAC AGATCCTGGG AGCCTCGTTC GCCGAGGCCC TCGCGGTGGC CGTCCCCGGT
GCCGCGGTAG GGACGGCCGC CGCGTGGCTC CTGCTGGCGG CCGGCCCCGC GGGCGCCGGG
CCGGCGACGG CGCTCGTCAC CGGCGTCGGG GCGGCGACGG CGCTCGTCGT CGTCGTCATC
ATGCTCGCCA CGAGTGCTGC GGACGCCGCG TCGTCGCACG GCCGGCGCAC GGCCGAGGCG
TCCGGCCGGG CCCGCACGGC CACGACCGGC GCCGCCGTCG CGCTCGTCAC CGCCGCCGCG
GCGATCGGCG TCTGGCAGCT GTGGCGGTAC GGCGACCCCG TCGTGACGCG CCCGGACGGC
TCCGTCACCG TCGATCCCGT CTCCGCCGCG GCGCCCGCGC TCGCTCTGCT GACCGGAGGC
CTGCTCGCGC TCGGTCTCGT CGGCCCCGTC AGCTCGTTCG CCGCGCGCAT CGCTACGCGG
ACGCGCGGGA CGTGGCCCGT CCAACCAGCG CGGCAGGTCG CCCGCCGGGT GGCCGTCTAC
GCCGTCCCCG TCCTCCTGCT CGTCCTCGCC ACCGGCTCCG CGTCGCTCGC CGCGGCGTTC
ACCGGGACCT GGACCAGCGT CCGCGCCTCG GCGACGGCTC TAGGGTCCGG GACCGACCTG
CGGGTGCCCG GGCACTCGGT GACGTACGTG TCGGCGTCGA CGCCGCCGCT CGGCCTGCCG
GAGCTCGCCG AGCTGCCGGG GGCGCGGGAC GCGGCGCCGG TCTGGAGTCT GGCCGCGAGC
GTGGACGACG TCCCGGTCAC GGGGCTGGCC GTGCCGGCCG AGGGGATCGC CGGCGCCGTC
GTCGCCCCCG AGGCGCTGTT CGACGCCTCG GCAGTCGCGG CAGCGCTCGA CGACGCCGCT
GCCCTCCCCG GGATCGAGCT GCCGGCGGGC ACGGAGTCCC TCGACCTGAC CGCGACGCTG
CAGGTGCTGG CCCGATCGAG CGGCGACCTG GTGTTCGGCG GGTCCGCGCA CCGCGACGGC
ACCGTGCGGG TGTGGTTCGC GAGCGACGAC GGCGAGGTCC TCGTGCGCGA CGCCGGCACG
CTCGTGGCGC GCGCGGAGCC GGACGTCCAC TGCTCGACCG ATCCGGACGG TGCGCTGACC
TCCTGCACGG AGGACCCGGC GACCCCCGGC CTCGGCGAAC CCGTCTCCGA GACGTTCGAC
GTGCCGGTGC CCGCGGACAC GGCGGGGTGG CGCGTCGTCG CGATCGACCT GGGGATCCGG
ACCCCGCCGC GGGCGGCCGA CCTGACGTTC ACCGTCGACG AGCTGAGCAT CGACGGCGAT
GCGCTGGAGC TCCCGGAGGG CTGGGAGCTG CACACGTCCA CCGAGGCAGG TGCCGGCCTC
GAGCCGATGC AGCCGCTGGG CCTCACCGGC ACGCTCGCGG CAGCCGACCC CGCGTCGTTC
GCGCTCGCTG CGCCCGCCCT GGAGACGGCG CGCCTCATGC CCGTGCACCC GGACGCCGTC
CCGCTCGCGG TCTCGACCGC CGCGGCCGAC GCGTTCGGCT GGTCGTCCGG TGACGACGTC
ACGCTCGCCG TCGACGGCAC CGACGTCCGG GCCCGGGTCG CGGCCGTCGT CCCCCTGGTG
CCGGGTTCGC GGGCGGCGGA GTCGATCCTC ACGACGCCGC AGGCGCTCGC CGGCACGCTG
CTCGCGAGCG GCACGTCGCC GAGCCTGCCC GCCGAGGTGT GGATCGCCTC GGACGCCCCG
GCCGAGACCG CCGCTGCGGT GGGCAACGTG CGCGGGACGG ACGCCCCTGC CGTGCTGAGC
GCCGACGCCG ACGCGGACCC CGTCACCGGC CCCGCACTGG ACATGTTCTG GCTCACCGCG
GGTGCGGCAG CCGCGCTGGC GATCGCCGGC ACGGGCGCCG TCGTCGTCGC GCTGGCCCGA
TCCCGCCGGG GCGAGGTCGT CGTGCTGCGT GCCATCGGCG AGTCGCCGAC GGACCAGGCG
CGCTCCCGCA GCACCGAGGT GCTCGCCGTC ACGCTCGCGG CGATCGTCGC CGGCGGTGTG
GTCGGGCTCG CGCTGAGCTG GCTCGTGGTC CCGCCGCTCG CCGCCACCGC CGCGAGCTCG
CTGCCCCTCG AGGTGGCTCT GCGGGTGGAC GCCGGCTGGG CGCTCGCGGC GGGCGGCGCG
CTGGTCGTCG CCGTCGCCGC CATCGCCCTC GCGCACGGCG CCCACGTCCG CTCCCAGGCG
CGGGACACCG AGTGGCGGGA GGAGATCCGA TGA
 
Protein sequence
MVTTAALLRR RARSQLGLLA LLGVLVALVA GVGAGALGFV VVSAEAGSRQ TIEEAPPTAS 
GVQVQTRLAD DAPAQDAAAT ARIDTETSGL PAVVDRSIRT GPLDVLAVAE EAPEVAQRVV
AGADDALAER AHLTDGAWPE PVTGEGAGTE ETPLQGVLHA LAAESLGAGV GDVLALGGED
AVHVVVAGLW EPDDGADPAW FGERVVVTGS SPADRGALGP LMLPESSLAA VPTQPFVRWT
VRADAQRVVP ADLAPLARAL ERIPAALDDE PGVVLRGATT TGTGAQELAA TAAALGAVRG
TVAVPLLVLA VVSALAIWQI VGLLVTVRST ETDLLTARGA TRGQILGASF AEALAVAVPG
AAVGTAAAWL LLAAGPAGAG PATALVTGVG AATALVVVVI MLATSAADAA SSHGRRTAEA
SGRARTATTG AAVALVTAAA AIGVWQLWRY GDPVVTRPDG SVTVDPVSAA APALALLTGG
LLALGLVGPV SSFAARIATR TRGTWPVQPA RQVARRVAVY AVPVLLLVLA TGSASLAAAF
TGTWTSVRAS ATALGSGTDL RVPGHSVTYV SASTPPLGLP ELAELPGARD AAPVWSLAAS
VDDVPVTGLA VPAEGIAGAV VAPEALFDAS AVAAALDDAA ALPGIELPAG TESLDLTATL
QVLARSSGDL VFGGSAHRDG TVRVWFASDD GEVLVRDAGT LVARAEPDVH CSTDPDGALT
SCTEDPATPG LGEPVSETFD VPVPADTAGW RVVAIDLGIR TPPRAADLTF TVDELSIDGD
ALELPEGWEL HTSTEAGAGL EPMQPLGLTG TLAAADPASF ALAAPALETA RLMPVHPDAV
PLAVSTAAAD AFGWSSGDDV TLAVDGTDVR ARVAAVVPLV PGSRAAESIL TTPQALAGTL
LASGTSPSLP AEVWIASDAP AETAAAVGNV RGTDAPAVLS ADADADPVTG PALDMFWLTA
GAAAALAIAG TGAVVVALAR SRRGEVVVLR AIGESPTDQA RSRSTEVLAV TLAAIVAGGV
VGLALSWLVV PPLAATAASS LPLEVALRVD AGWALAAGGA LVVAVAAIAL AHGAHVRSQA
RDTEWREEIR