| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1554 |
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| Symbol | |
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| ID | 7859710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1782165 |
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| End bp | 1783400 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 643865639 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002881572 |
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| Protein GI | 229820046 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.230024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.603262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCGCG CGGCGTCCGA CGACGTCCTC GTCCGCATCG TCCGCGACGA GGCGGGGCTC
ATCGTCGGCG CGCTGACCCG CCGCACCGGC AGCTTCGACG TCGCCGAGGA GGCGGTCCAG
GACGCGGTCG TCACGGCGCT GGACCTCTGG CGCCGTGACG GCGTGCCGCC CAACCCGGCC
GGCTGGCTGA CGACGACGGC CTGGCGCAAC GCCGTCGACC GCCTCCGCCG CGCGACGCGC
CAGGACGCGG CCCTGCGCCG GCACGCCGAG CGTCGGGAGA CGGTCGCCGG CGAGGTGGCG
GACGTCGACG AGGTCCCCGC GATCGAGACG GACGAGCGCC TCCCGATGCT GTTCGCCTGC
TGCCACCCGT CGCTCGCCCC GCCGGCCCGC CTCGCCCTGT CGCTGCGCGC CGTCGTCGGC
CTCACGACGG CCCAGATCGC CGGCGCGTTC CTCGTCCCGG AAGCGACGGC CGCGCAGCGG
ATCGTGCGCG CCAAGCGGAA GATCGTGGCC GCGGGAATCC CGCTCCAGGT GCCCGACGGC
GCAGCGCTGC CGTCGCGCCT CGACGACGTC CTGTCCGTGG TCACGCTGTG CTACAACGCC
GGCTACCTGC GGGCCGACGA CGTCGGGCGC CGCCTCGCGG GCGACGGTGC CTGGCTGGCG
CGCGTCGTCG CGCAGCAGCT GCCCCGCGAG CCCGAGGCGC TCGCCGTGAG CGCGATGCTC
GCGATGCTCG AGGCGCGGGC GGCGACCCGC TTCTCGGCCG ACGGCGTCCT GGTGCCGCTG
GCGGAGCAGG ACCGCTCACG CTGGGACCAC GAGGCGATCC GCGCCGCCGA CGACCTGCTC
ATGCGGGCCG CCTCGTACCA CCGGCCCGGG AGGTTCCAGC TGCAGGCGGC GATCACCGCC
TGCCACACCA CGGCGCCGTC GGCCGCCGAG ACCGACTGGC TCCAGGTCCT CACGCTGTAC
GACATGCTGG CGGCGCGGGA CCCGTCGCCG GTGGTGCGGC TGAACCGCGC CGTGGCGCTC
GCGGAGATCG CGGGTCCGGA GGCGGCGCTC GCCGAGGTCG ACTCCCTCGC GACCCAGCTG
GCCGGGTACC ACCTCCTGCA TGCCACGCGG GGCGACCTCC TCGCCCGGCT CGGGCGGAGG
GCAGAGGCCG AGGAGGAGTA CGCGGCGGCC CTCGAAAGGG CTGCGTCCGA GGCCGAGCGT
GCGCTGCTGC GCACCCGCCT CGGCCCGCTC GTGTGA
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| Protein sequence | MIRAASDDVL VRIVRDEAGL IVGALTRRTG SFDVAEEAVQ DAVVTALDLW RRDGVPPNPA
GWLTTTAWRN AVDRLRRATR QDAALRRHAE RRETVAGEVA DVDEVPAIET DERLPMLFAC
CHPSLAPPAR LALSLRAVVG LTTAQIAGAF LVPEATAAQR IVRAKRKIVA AGIPLQVPDG
AALPSRLDDV LSVVTLCYNA GYLRADDVGR RLAGDGAWLA RVVAQQLPRE PEALAVSAML
AMLEARAATR FSADGVLVPL AEQDRSRWDH EAIRAADDLL MRAASYHRPG RFQLQAAITA
CHTTAPSAAE TDWLQVLTLY DMLAARDPSP VVRLNRAVAL AEIAGPEAAL AEVDSLATQL
AGYHLLHATR GDLLARLGRR AEAEEEYAAA LERAASEAER ALLRTRLGPL V
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