| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1548 |
|---|
| Symbol | |
|---|
| ID | 7859704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1777611 |
|---|
| End bp | 1778069 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643865633 |
|---|
| Product | ribose 5-phosphate isomerase |
|---|
| Protein accession | YP_002881566 |
|---|
| Protein GI | 229820040 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
|---|
| TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR02133] ribose 5-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.672639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.270598 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTGC GGATCGTCGT CGGCGCGGAC AGCGCGGGCT TCGAGTACAA GGAGGCGCTC
AAGCGCGACC TCGAGGCTGA CGAGCGCGTG AGCGACGTCG TCGACGTGGG CGTGGACGCG
GGCGGGCAGA CGGACTACCC GCACGTGGCC GTGTCTGCGG CCCGGCTCGT GGCGCGGGGG
GAGGCCGACC GGGCGCTGCT CGTGTGCGGC ACGGGGCTCG GCGTCGCGAT CGCGGCGAAC
AAGGTGCCGG GGATCCGGGC CGTGACGGCG CACGACTCGT ACTCCGTCGA GCGCTCGGTG
CTGTCGAACG ACGCCCAGGT GCTGACGTTC GGCCAGCGCG TCATCGGGCT CGAGCTGGCG
CGCAAGCTCG CGGCGGAGTG GCTCGCGTAC ACGTTCGACG CCTCGTCGCC GTCGGCGGTC
AAGGTGTCGG CGATCTCGGA GTACGAGGCG CGTGACTAG
|
|---|
| Protein sequence | MGLRIVVGAD SAGFEYKEAL KRDLEADERV SDVVDVGVDA GGQTDYPHVA VSAARLVARG
EADRALLVCG TGLGVAIAAN KVPGIRAVTA HDSYSVERSV LSNDAQVLTF GQRVIGLELA
RKLAAEWLAY TFDASSPSAV KVSAISEYEA RD
|
|---|
| |