| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1545 |
|---|
| Symbol | |
|---|
| ID | 7859701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1773877 |
|---|
| End bp | 1774887 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643865630 |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
|---|
| Protein accession | YP_002881563 |
|---|
| Protein GI | 229820037 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.155387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.195533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGC AGATCGAGAG GGTCGCCGTC GTCGGCTCCG GGTACATGGG CACGGGGATC
GCGCAGGTGC TCGCCGGCGC GGGGCTCGAC GTCGTGCTCG CGGACGCCGA CGCCGAGCGC
GCTCGCGCCG GGCACGCCCG CGTCCTCGCC GAGGCGACGT CCGCCGAGGA GGCCGGGACC
GCCCCCGGAG GCACGGCCGA GCGCGTCGCC GCGCACCTCA CGTGGGCGGC CAGCGCCGCC
GAGGCGGCCG ACGGCGCGGA CTTCGTGGAG GAGGCGGTGC CCGAGGTGCT CGGCCTGAAG
CGGCGGGTCC TCGCGGAGGT CTCCGCGGCC ACCGCGACGG CGATCATCGG CAGCAACACC
TCGACGATCC AGGTGCGCGC GCTCGCGGAC GCCGTCGCGG ATCCGAGCCG GTTCCTCGTC
GTGCACTGGA GCAACCCGGC GCAGCTCGTG CCCGGCGTCG AGCTGGTGTC GGGCGAGGCC
ACGGATCCGG CGGCGGCCGA CGCCGTCCGC GCGATGATCG ACGGCGTCGG GCGCGTGAGC
GCGCAGCTCG GCGACGCCCC GGGCTTCGTG CTCAACCGGC TGCAGTTCGC GCTGGTGAAG
GAGGCGCTCG CGATCGTGGA GGAGGGTCAC GCCTCCCCGG CGGACGTCGA CGCCGTGGTG
CGGAGCACGC TCGGCTTCCG GGCCGGGTTC TTCGGCCCAC TCGAGATGCT CGACATGGCG
GGCCTCGACG TCTACGCCGA CTGCTACGCG TCGCTCGAGC GCGAGCTCGG CCCGCGGTTC
GCGCCGCCGC GGATCCTCAC GGACGCCGTC GAGCGGGGTC GGCACGGCAT GAAGAACGGC
GCCGGCCTGT GGCGGGACTA CACGGACGAC GACGTCGCCG CGCTCACGGC GTGGCGCACT
CTCGCCTACT CCCGGATGGC TGACCTGCTG CGCGAGCTGC CCCCGGCGCC CGTGCGGGCG
GCCACGGCGG CGTCGTCCGA CGACCCCGAC CTCGAGAGGA CCCCCGCATG A
|
|---|
| Protein sequence | MKQQIERVAV VGSGYMGTGI AQVLAGAGLD VVLADADAER ARAGHARVLA EATSAEEAGT
APGGTAERVA AHLTWAASAA EAADGADFVE EAVPEVLGLK RRVLAEVSAA TATAIIGSNT
STIQVRALAD AVADPSRFLV VHWSNPAQLV PGVELVSGEA TDPAAADAVR AMIDGVGRVS
AQLGDAPGFV LNRLQFALVK EALAIVEEGH ASPADVDAVV RSTLGFRAGF FGPLEMLDMA
GLDVYADCYA SLERELGPRF APPRILTDAV ERGRHGMKNG AGLWRDYTDD DVAALTAWRT
LAYSRMADLL RELPPAPVRA ATAASSDDPD LERTPA
|
|---|
| |