Gene Bcav_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1540 
Symbol 
ID7859696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1768782 
End bp1769645 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content73% 
IMG OID643865625 
Productaldo/keto reductase 
Protein accessionYP_002881558 
Protein GI229820032 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.199224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG CGGCACTCCC GGCGGCGCCG ATCACCGCCA CCGTCGAGAT CGCGCCCGGC 
GTCCACGTCC CCCAGGTGGG GCTCGGCGTC TTCCAGGTCG CGGCCGACGA CGTCCAGCCC
GTGGTCGAGG AGGCGCTCGA GGTGGGCTAC CGCCACTTCG ACACCGCCGC CGCGTACAAC
AACGAGGCCG GCGTGGGTGC GGCGGTCCGC GTCTCGGGGG TGCCGCGCGA GGACGTCGTG
GTGACGTCCA AGCTCCGCAA CGGCGAGCAG GGGTACGAGT CGGCGCTGCG CGCCTACGCC
GACACGTGCC AGAGGCTCGG CCTCGACCGG CTCGACCTCT ACCTCATCCA CTGGCCGAAC
CCCGAGGCGG GGCTCTGGCC CCAGTCGTGG CGCGCGTTCG AACGCCTCCG GGCGGATGAC
GACGTGCGGG CGATCGGGGT GTCCAACTTC CTCCCGGAGC ACCTACGCCG GCTCGCGGCG
GAGGCTCAGG TGCTCCCCGC GGTCAACCAG GTCGAGCTGC ACCCCACCCA CACCCGGCCC
GACGTCGTCG CCGCCTGCCG CGACCTCGGG ATCGTCGTCG AGTCGTACTC GCCGATGGGG
CAGGGGCAGG ACCTCGGCGG CGCCCCGGTC CTCGCGGCGG CCGCAGCGCA CGGCGTGACG
CCCGCGCAGG TCGTCCTGCG CTGGCACCTG CAGCACGGGT ACGTGGTCAT CCCGAAGACG
ACGTCGCGGG CGCGGCTCGT CGAGAACCTC GACCTCGACT CCTTCGAGCT CGCTCCGGAG
GAGATGGCGG CGATCGACGA CCTCGACGCC GGCCGGCGGA TCGGTAACGA CCCGAGCACG
TTCTCGATCA GCCAGATCCG CTGA
 
Protein sequence
MSAAALPAAP ITATVEIAPG VHVPQVGLGV FQVAADDVQP VVEEALEVGY RHFDTAAAYN 
NEAGVGAAVR VSGVPREDVV VTSKLRNGEQ GYESALRAYA DTCQRLGLDR LDLYLIHWPN
PEAGLWPQSW RAFERLRADD DVRAIGVSNF LPEHLRRLAA EAQVLPAVNQ VELHPTHTRP
DVVAACRDLG IVVESYSPMG QGQDLGGAPV LAAAAAHGVT PAQVVLRWHL QHGYVVIPKT
TSRARLVENL DLDSFELAPE EMAAIDDLDA GRRIGNDPST FSISQIR