| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1539 |
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| Symbol | |
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| ID | 7859695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1767049 |
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| End bp | 1768785 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643865624 |
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| Product | glycoside hydrolase family 39 |
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| Protein accession | YP_002881557 |
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| Protein GI | 229820031 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3664] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.262725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACAG CGGTTCCCAC CCAGGACGTG AACCCCGGCA TCTCCAGCGA GCGCGCGTTC
CCGCGCAACG CACCGAGCGA CCCGAGCGCA CCGCACGTCG CCGCCGCGCG TGTTCAGGTG
CACGCGGACG ACGACGCCGG CCCGCTCACC CGTCTGTGGG AGAGCGTGGG CTACGACGAG
ATCAACTGGA CCTACACGCC GACGGGCCGC CACCTGCTCG GCACGTTCGG TGAGCTCACG
ACCACCGGCT ACCACGTGCG TCCGCACTAC GTGTTCTGCT CCGGCTCCGG TTTCGGCATC
CCGCACTGGG GGAACGGGAA CGTCTACCAC GAGGACGCCG AGGGCAACGT CACGTACGAC
TTCACGATCG TCGACCAGAC GTACGACGCG ATCGTCGAGG CCGGCCACCA CGTGCTCGTC
GAGCTCGCCT TCACTCCGCG CGACCTGCTG CCGCCGGAGG CCGAGGAGCT CGCCGTCGTC
AGCAGCCCCA CGGTGTACTC CGCGTACGAG GCGGGCCAGT GGTCCTACCC GCCGCGCGAC
TACGGCCGCT GGCGCGACCT GGTCGCCGCC CTCGCCGCGC ACTGCCTCGA GCGGTACGGC
GCCGAGGAGG TCGACACGTG GCTGTGGGAG CTGTGGAACG AGCCGGACAT CTTCTACTGG
CGAGGCACCC CCGAGCAGTT CTACGACCTG TACGCGGTCA CCGCCGAAGG CGTGCGGAGC
GTGCTGCCGC AGGCGAAGGT CGGCGGCCCG GCCGTGACGG GGGGCGGTGC CGAGTTCCTG
CGCGGCTTCC TCGCCTACAC CGAGGCGCAC GACGTGCCCG TCGACTTCGT CTCGTTCCAC
ACGAAGGGCT CGGCGTTCAC CCCGTGGCGC GTCTACGGGC CGACCGGCGG TCCCGCACCG
GCGAAGCAGA GCCCGTCGGC GCACAAGATG CTCCACGAGA TCCGCACGAT GCTGCGGGTG
ATGGCCGAGT TCCCGGCCTA CAAGACGCTC CCGGCGATCG TCGACGAGTG CGACGCCGGC
GTCCCGGCGC ACTACTCCTT CTACGACAAC GCGAACTTCG TGTTCCAGAA CACCGAGTAC
TACCCGGTGT TCCAGGCGAA GCTCATGAAG AAGATCCTCG ACCTGTCGGA CCTCGAGGGC
GCCAACGTCC AGCAGGCGAC GTCGTGGAGC TTCTACTTCG AGGGCGAGCG CTACTTCGAG
GGCACGCGGT CGTTCCTCAC GGCCGGCGGC GTGGAGAAGC CGTTCCTCAA CGCGTACCGG
ATGCTGGCGA GGCTCGGCGA GCGCCGCGTC ACCGCGACCT CCGACGCCGC CCACGGCGTC
GACCTGCTCG ACGAGGCCGC GGGCCGGAGC ATGCCGGAGG AGGTCGACGT CCTCGCCTCG
CGCGCGCAGG ACGGGTCGGT GGCGGCGCTG GTGTGGCGTC ACACGGACGA CCAGTACCGC
ACCGCCGAGT CCGCGACCCC CGTGACCGTC GACGTGACGG GCCTCGCCGC GGGCGCCTAC
CGGCTGACGC ACCAGCGGAT CGACGCTGAG CACAGCAACT CGCACACGGT GTGGCAGGAG
CTCGGCGCAC CACAGGTCCC GACCGACGAG CAGCTCGCCG CGATCCGTGA GCGGCAGGGC
CTCGAGGAGC TGGAGCCGGC GCGCGAGGTG ACGGTGGGCG ACGACGGCGC GGTCAGCCTC
GTGGTCGACC TCCCGCTGCC CGCGGTGTCG TTGCTCGTGC TGGAGCCGGT CCGGTGA
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| Protein sequence | MTTAVPTQDV NPGISSERAF PRNAPSDPSA PHVAAARVQV HADDDAGPLT RLWESVGYDE
INWTYTPTGR HLLGTFGELT TTGYHVRPHY VFCSGSGFGI PHWGNGNVYH EDAEGNVTYD
FTIVDQTYDA IVEAGHHVLV ELAFTPRDLL PPEAEELAVV SSPTVYSAYE AGQWSYPPRD
YGRWRDLVAA LAAHCLERYG AEEVDTWLWE LWNEPDIFYW RGTPEQFYDL YAVTAEGVRS
VLPQAKVGGP AVTGGGAEFL RGFLAYTEAH DVPVDFVSFH TKGSAFTPWR VYGPTGGPAP
AKQSPSAHKM LHEIRTMLRV MAEFPAYKTL PAIVDECDAG VPAHYSFYDN ANFVFQNTEY
YPVFQAKLMK KILDLSDLEG ANVQQATSWS FYFEGERYFE GTRSFLTAGG VEKPFLNAYR
MLARLGERRV TATSDAAHGV DLLDEAAGRS MPEEVDVLAS RAQDGSVAAL VWRHTDDQYR
TAESATPVTV DVTGLAAGAY RLTHQRIDAE HSNSHTVWQE LGAPQVPTDE QLAAIRERQG
LEELEPAREV TVGDDGAVSL VVDLPLPAVS LLVLEPVR
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