Gene Bcav_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1538 
Symbol 
ID7859694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1766054 
End bp1766782 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content72% 
IMG OID643865623 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002881556 
Protein GI229820030 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0494418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCGG CCGACGGCGG AGCACGCCCG CCCGGCGGCG CGGACGCGCA CTCGATGAGC 
CAGGTCAGGT GGGCGGCACC ACCGCGCACG TCGCTCGGCG AGTACGTGGT GCGCGAGCTC
CGGGAACGCA TCGCGACCGG CGAGCTGCGC CCGGGTGAGC ACCTGCGGGA GACCGAGCTC
GCCGCCGCCC TGAACGTCAG TCGCGGGCCG GTCCGCGAGG CCTTCGCGAT CCTCGAGGCC
GAGGGGCAGG TCGAGATCCG CCGTCACCGC GGGGCATTCG TCAGCGTGCT CACGCGGCGC
GACGTCGAGG AGGTGCACAC GCTGCGGACC GCGATGGAGG CTCTCGCCGC GGAACGTGCC
GCGACGCGCC TGACGCCGGC GCACTTCGCG GAGATGGACC GTGTCCTCGA GGCGATGAAG
GGCACATCGG GTTCCGTGGC GCCGCAGGAG GCCGTGGCCC TCGACCTGGC CTTCCACGAC
GTGATCTACG ACGCCGCGGA CCACGCCCGG CTGCAACGGG TCTGGACGTC GCTGCGCAGC
CAGGTGTCGT TCTTCCTGCA CACGCGCAAC GTCAACTTCC CCGACTTCCC CACGGTCGGG
TTCTCGGAGC ACTTCGAGCT GCGCGAGGCG CTGGCCGGCG GCGATCCTGC GGTGGCGCGG
GCCGCCGCGG AGAAGCACAT GACCGGCGCG TACTCCCGAC TCAGCCAGCT CGAGCTACCT
GAGGTGTGA
 
Protein sequence
MEAADGGARP PGGADAHSMS QVRWAAPPRT SLGEYVVREL RERIATGELR PGEHLRETEL 
AAALNVSRGP VREAFAILEA EGQVEIRRHR GAFVSVLTRR DVEEVHTLRT AMEALAAERA
ATRLTPAHFA EMDRVLEAMK GTSGSVAPQE AVALDLAFHD VIYDAADHAR LQRVWTSLRS
QVSFFLHTRN VNFPDFPTVG FSEHFELREA LAGGDPAVAR AAAEKHMTGA YSRLSQLELP
EV