Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1538 |
Symbol | |
ID | 7859694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1766054 |
End bp | 1766782 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643865623 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002881556 |
Protein GI | 229820030 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0494418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGCGG CCGACGGCGG AGCACGCCCG CCCGGCGGCG CGGACGCGCA CTCGATGAGC CAGGTCAGGT GGGCGGCACC ACCGCGCACG TCGCTCGGCG AGTACGTGGT GCGCGAGCTC CGGGAACGCA TCGCGACCGG CGAGCTGCGC CCGGGTGAGC ACCTGCGGGA GACCGAGCTC GCCGCCGCCC TGAACGTCAG TCGCGGGCCG GTCCGCGAGG CCTTCGCGAT CCTCGAGGCC GAGGGGCAGG TCGAGATCCG CCGTCACCGC GGGGCATTCG TCAGCGTGCT CACGCGGCGC GACGTCGAGG AGGTGCACAC GCTGCGGACC GCGATGGAGG CTCTCGCCGC GGAACGTGCC GCGACGCGCC TGACGCCGGC GCACTTCGCG GAGATGGACC GTGTCCTCGA GGCGATGAAG GGCACATCGG GTTCCGTGGC GCCGCAGGAG GCCGTGGCCC TCGACCTGGC CTTCCACGAC GTGATCTACG ACGCCGCGGA CCACGCCCGG CTGCAACGGG TCTGGACGTC GCTGCGCAGC CAGGTGTCGT TCTTCCTGCA CACGCGCAAC GTCAACTTCC CCGACTTCCC CACGGTCGGG TTCTCGGAGC ACTTCGAGCT GCGCGAGGCG CTGGCCGGCG GCGATCCTGC GGTGGCGCGG GCCGCCGCGG AGAAGCACAT GACCGGCGCG TACTCCCGAC TCAGCCAGCT CGAGCTACCT GAGGTGTGA
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Protein sequence | MEAADGGARP PGGADAHSMS QVRWAAPPRT SLGEYVVREL RERIATGELR PGEHLRETEL AAALNVSRGP VREAFAILEA EGQVEIRRHR GAFVSVLTRR DVEEVHTLRT AMEALAAERA ATRLTPAHFA EMDRVLEAMK GTSGSVAPQE AVALDLAFHD VIYDAADHAR LQRVWTSLRS QVSFFLHTRN VNFPDFPTVG FSEHFELREA LAGGDPAVAR AAAEKHMTGA YSRLSQLELP EV
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