Gene Bcav_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1485 
Symbol 
ID7861594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1697290 
End bp1698564 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content71% 
IMG OID643865570 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002881503 
Protein GI229819977 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2182] Maltose-binding periplasmic proteins/domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC GTCTGACCCT CGCGACAGCC CTCGCGGCGT CCGCGGCGCT CGCTCTCACC 
GCCTGCTCGG GCGGGGCATC GGGGGCCGAG GACGACGAGA GCCCCACGCC GAGCGCCGAG
GAGTCGGAGG CGCCGAGCGA CCTGACCGGC TCGCTCGAGA TCTGGACCGA CGGGACGAAG
TTCCCCGCCG TCGAGGCGAT CATCGCCACG TTCGAGGCCG ACTACCCCGG CGTCGACGTC
GAGCTCGTCC AGAAGAACTT CTCGGACATC GGCAACGACT TCACCACCCA GGTGCCCACG
GGCGAGGGCC CGGACATCAT CGTCACGCCG CACGACGCGA TCGGGAACTT CGTCAAGGCC
GGCCTCATCG CGCCGGTCGA ACTCGGTGCG CTCGCCGACG CGCTCAACCC CGTCGCCGTG
GAGGCCTTCT CCGTGGACGG CCAGGCGTAC GGAGTCCCGT ACGCGCTCGA GAACATCGGC
CTCATCCGGA ACAACGCGCT CACGACCGAC GCCCCGGAGA CGTGGGACGA GATGCTCGCC
TCGACGGACG CCGTCGGCGC CGAGTTCGGC ATGGTCACAG CCGTCACCGA GGCCGGCAAC
CCCTACAACA TGTACCCCGT CGAGACGTCG TTCGGGTCGG AGATCTTCGC GCGCGACGAC
CAGGGCAACT ACCTGCCCGA GCTCACGCTC GGGAACGAGG AGGGCTTCGC GTTCGCGGAG
TGGCTCGGCA CGCAGGGCCC CGGCGGAACC GGCGCCTTCG ACCCGGCGAT GACCGACGAC
ATCGCCAAGC AGGCCTTCCT CGACGGCCGC GCGCCGTACT TCCTCAGCGG GCCGTGGCAG
GGTGCCGACA TCCGGGAGGC GGGGCTCGAC GTCGACGTCC TCCCCGTGCC GTCGGCCGGC
GGTGAGCCGT CGCGACCGTT CGTGGGCGTG CAGGGCTTCG TCGTCTCCGC CGAGAGCGAG
AACCAGCTCC TCGCGAACGA GTTCCTCACC AGCTACGTCG GCTCGGTCGA GGGTCAGCTC
GAGCTCTTCC GCTACGGCCC CGGGACGCCG GCGCTCACCG AGGCGGCGGA GTCGCCCGAG
GTGACCGACG ACCCGCTCAA CGCCGGGTTC GCCGCCGCTG GCGCGGACGG CGTGCCGATG
CCCTCGATCC CCGAGATGGG CCTGGTCTGG GTCCCCTGGG GTCGGGCGCA GGTCGACATC
ATGAACGGGG CAGACCCGCG CGCGACGTGG CAGACGATGG CGGACAACAT CCAACAGGCG
ATCGACGAGA GCTGA
 
Protein sequence
MKQRLTLATA LAASAALALT ACSGGASGAE DDESPTPSAE ESEAPSDLTG SLEIWTDGTK 
FPAVEAIIAT FEADYPGVDV ELVQKNFSDI GNDFTTQVPT GEGPDIIVTP HDAIGNFVKA
GLIAPVELGA LADALNPVAV EAFSVDGQAY GVPYALENIG LIRNNALTTD APETWDEMLA
STDAVGAEFG MVTAVTEAGN PYNMYPVETS FGSEIFARDD QGNYLPELTL GNEEGFAFAE
WLGTQGPGGT GAFDPAMTDD IAKQAFLDGR APYFLSGPWQ GADIREAGLD VDVLPVPSAG
GEPSRPFVGV QGFVVSAESE NQLLANEFLT SYVGSVEGQL ELFRYGPGTP ALTEAAESPE
VTDDPLNAGF AAAGADGVPM PSIPEMGLVW VPWGRAQVDI MNGADPRATW QTMADNIQQA
IDES