Gene Bcav_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1483 
Symbol 
ID7861592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1694783 
End bp1695661 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content66% 
IMG OID643865568 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002881501 
Protein GI229819975 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3833] ABC-type maltose transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.796651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGC TGTCCCGCCC CGCCGCGACG CCGTCGCCGA TGCACCGGTT CCGTGACGTG 
GGCTGGCGCC ACGTGTTCGC CGTGCTCGTG TGTCTGTACG CGATCTTCCC GATCGTCGTC
ATCGTCTCCG CGGCGTTCCG CGACTCCGGC ACGCTTGTCG GGAGCAACCG CCTCTTCGAG
AGCGTGTCGC TGAACAATCT CGCGGACCTC AACTCCACGA TGTTCTGGAC CTGGGTCCGG
AACACCATCG GAATCGCCGT CGTGACGGCC ATCGGCACGG TTCTCCTCGG CGCCGCGGCG
GCCTACGCGT TCTCCCGGTT CCGGTTCCGG GGCCGCCGAG GAACGCTCAT CTCGCTGCTC
ATCATCCAGA TGTTTCCCCA GATCCTCGCG TTCGTGGCCC TGTTCCTGCT GCTCACGGCG
CTCGGCAAGG TGGTGCCGAT CCTGGGGCTG AACAGCCACC TGGGCCTCGT CATGGTCTAC
CTGGGCGGTG CGCTCGGCGT GAACACGTTC CTCATGTACG GGTTCTTCAA CACCGTGCCC
CGCGAGATCG ACGAGGCGGC GAAGATCGAC GGCGCGACGC ACGCCCAGAT CTTCTGGGCG
CTGATCCTCC GGTTGACGGC GCCGATCCTC GTCGTCGTCG GCCTGCTGTC GATCATCGGG
ACCGTCTCGG ACTTCGTGCT GCCGAAGGTG ATCCTCCAGT CGCAGGAGAA GTGGACGATC
GCCGTCGGGC TGTTCCAGTT CGTGTCGGAG ACGAACAACT CGAACTGGGG GGTCTTCGCG
ATCGGCTCGG TCATCGCCGC CACGCCGATC GTGATCCTGT TCCTGTTCCT GCAGCGCTAC
ATCGTCTCCG GCCTGACCGC CGGAGCCGTC AAGGGGTAG
 
Protein sequence
MTALSRPAAT PSPMHRFRDV GWRHVFAVLV CLYAIFPIVV IVSAAFRDSG TLVGSNRLFE 
SVSLNNLADL NSTMFWTWVR NTIGIAVVTA IGTVLLGAAA AYAFSRFRFR GRRGTLISLL
IIQMFPQILA FVALFLLLTA LGKVVPILGL NSHLGLVMVY LGGALGVNTF LMYGFFNTVP
REIDEAAKID GATHAQIFWA LILRLTAPIL VVVGLLSIIG TVSDFVLPKV ILQSQEKWTI
AVGLFQFVSE TNNSNWGVFA IGSVIAATPI VILFLFLQRY IVSGLTAGAV KG