| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1481 |
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| Symbol | |
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| ID | 7860950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1690988 |
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| End bp | 1693159 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643865566 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002881499 |
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| Protein GI | 229819973 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.653482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGGCACG CGTTCCGCAA GGTGACCCCT GTCCTCGTCA GCGCGGCGGG GCTCGCGCTG
CTCGTGCCGA CCGCCGTCGC GGCGCCTGCC GAGTCCGCCC CGGCCGCCTC GGGCCACGGC
CACGCTCGCC CGCCCGTGAC CGAACCGTGG CGCTCGCCGA TCGACGGCGA GCAGTTCTAC
TTCGCCATGA CCGACCGGTT CGCCGACGGC GACCCCAGCA ACAACCTCGG CGGCTACGCG
CCGGAGGAGT CCGGGTACGA CCCGACGAAC CCGAACTTCT ACCACGGTGG TGACCTGGCG
GGCCTCGAGG CGGGACTCGA CTACATCGCC GGGCTCGGCA CGGATGCGAT CTGGGTGACG
CCGCCGATGA CGAACAAGCC GATGATGGTG TTCTGGGGCT TCTATGAGCT CGCGGCCTAT
CACGGCTACT GGACGCTCGA CCTCACGACC ATCGACCCGC ACCTCGGCGG GGACGAGGCC
ATGCGGTCGT TCATCGCCGC AGCGCACGAC CGCGGTATCA AGGTGTACTT CGACATCGAG
ATCAACACGA CCGCCGACAT CATTCAGTAC GCCGACGGTG ACGCGACCTA TGTGCCGATC
GCCGAGCGGC CGTGGCGGGA CGCCGACGGA AACCCGATCG ACATCGCCGA GCTGGCAGGG
GAGGAGTTCC CGGAGCTGGA TCCGGCCGTC TCCTTCCCCC ACGAACCGGT GATCCCGGCG
GGCCAGGAGG ACGCGAAGAC GCCAGCGTGG CTCAACGACC CCACGCTCTA CCACAACCGC
GGTGACTCGA CCTTTACCGG CGAGTCCGTG ACGTACGGCG ACTTCCTCGG CCTCGACGAC
CTGATGACCG AGCACCCGCG CGTCGTCGAG GGAATGATCG ACGTCTACAC GGACTGGATC
GACTTCGGCG CCGACGGCTT CCGCATCGAC ACGGCCAAGC ACGTGAACTT CGAGTTCTGG
CAGGAATGGT CAGCGGCGAT CATGGATCAC GGCCACAGCG TGGGGCGCGA GGACTTCTAC
ATGTTCGGTG AGGTGCTGGA GTTCGAGCAG CAGGTGCTCG CCCCGTACGT CCGCGACACC
GACATCGGCG GGATCCTGGA CTTCCCGTTC GCCGGCAGCG TCATCGACTT CACGCGCGGC
GGTGCGCCGT CCGAGCTCGG CGAGTTCTTC GGCGAGGACG ACCGCTATCT CACGCCGGCA
TCCTCTGCGG CCGGTCTGCA GACCTTCGTC TCCAACCACG ACATCGGACG TATCGGGCAG
CAGCTCGCGG GGACTGACCA CGCCGCCGAC CGCACCCGGC TCGCGCAGGA CATCCTCATG
CTCAGCCGCG GCAACCCGAT CGTGTACTAC GGCGACGAGC AGGGCTTCAC GGGTGGCGGG
ACCGACGACG CCGGAAACCC GTTGGCCGCC GACGTCGCCG GGCGGCAGGA CATGTTCGGC
ACCCAGGTCT CCGGGTATCG CAGCCAGCTG CTCGTCGACG GGACGCTGAT GGGTGACGGC
GCGCACGTCG ACACCGACGT CCCGCTGTAC GAGCGCATCA GCGAGCTTGC GGACCTGCGC
TCCGAGTACC CGGCGCTCGC CACAGGGGCG CAGGTCGAGC TTCCCGTCAC GCAGGACGAG
AGCGGGATCG CGTTCGCCCG GATCGATCGC GACGAAGAAC GCGAGTACGT GGTGCTGTTC
AACAACAGCA CGACGAGTCA GACGCTCGAG GTGGATGCCT TCACCCAGCG GAGCCGGTTC
CGGTATCTGC TCGGGGACGG GCGCGCGCCG CGTTCCGACG CCGACGGCGT GCTGCAGGTG
AGCGTCCCGG CGCTGGGCAC CGTCGTGCTT CGCGCGGACC GGCCCCTGCG AGCACCGGCA
CGGCCTGAGG CCGTGACGCT GGACGCCGTC GCCGCGGACG AGCAGTACGT GCAGGTGAGC
GCGCAGGTCG ACCAGGACCA CTGGTACGAG ACGTCGTTCT CGTGGCGGGA GGGGTGCACG
GGCGAGTGGC AGCCGCTCGG TACTCACGAC CGCAACCACC CTCGCGTGTT CCACGACGTC
CGGGCCCTGG CCGCGGGCAC CACGGTGGAG TACGCGGCGG TCACGACCGA CGTGCGAGGC
CGCCACTCGG AGGCGCGGAC CGAGCTCGTG ATCCCGGGAG GGGACGCCTC GGCCACCGGC
TCCTGTCGGT GA
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| Protein sequence | MRHAFRKVTP VLVSAAGLAL LVPTAVAAPA ESAPAASGHG HARPPVTEPW RSPIDGEQFY
FAMTDRFADG DPSNNLGGYA PEESGYDPTN PNFYHGGDLA GLEAGLDYIA GLGTDAIWVT
PPMTNKPMMV FWGFYELAAY HGYWTLDLTT IDPHLGGDEA MRSFIAAAHD RGIKVYFDIE
INTTADIIQY ADGDATYVPI AERPWRDADG NPIDIAELAG EEFPELDPAV SFPHEPVIPA
GQEDAKTPAW LNDPTLYHNR GDSTFTGESV TYGDFLGLDD LMTEHPRVVE GMIDVYTDWI
DFGADGFRID TAKHVNFEFW QEWSAAIMDH GHSVGREDFY MFGEVLEFEQ QVLAPYVRDT
DIGGILDFPF AGSVIDFTRG GAPSELGEFF GEDDRYLTPA SSAAGLQTFV SNHDIGRIGQ
QLAGTDHAAD RTRLAQDILM LSRGNPIVYY GDEQGFTGGG TDDAGNPLAA DVAGRQDMFG
TQVSGYRSQL LVDGTLMGDG AHVDTDVPLY ERISELADLR SEYPALATGA QVELPVTQDE
SGIAFARIDR DEEREYVVLF NNSTTSQTLE VDAFTQRSRF RYLLGDGRAP RSDADGVLQV
SVPALGTVVL RADRPLRAPA RPEAVTLDAV AADEQYVQVS AQVDQDHWYE TSFSWREGCT
GEWQPLGTHD RNHPRVFHDV RALAAGTTVE YAAVTTDVRG RHSEARTELV IPGGDASATG
SCR
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