| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1474 |
|---|
| Symbol | |
|---|
| ID | 7860943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1683057 |
|---|
| End bp | 1684094 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643865561 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_002881494 |
|---|
| Protein GI | 229819968 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.470047 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGACG CGGGCGTGCC GGCCGCCGAC GCCGCCGCGG GGCGGCGGGC GTCGACGCTC
AAGGACGTCG CCCGGCTCGC CGGTGTCTCC GTGGGAACGG CGTCACGCGC GCTCAACGAC
CGGGCCGAGG TGAGCGCGGC GACGAAGCAG AAGGTGCGCT CGGCGGCCGA GCGGCTGTCG
TTCTACCCCA ACGCGCTCGC GACGGGGCTG CTCCGCGGCC GGACCAAGTC GATCGGGCTG
CTGACCGGCG ACGTCAACGG CCGGTTCTCG ATCCCGATCC TCATGGGCCT GGAGGATGCG
TTCGGGGTCG GCGAGATGTC GGTGCTGATG TGCGAGGGTC GGGGCGACCC CGAGCGCGAG
GCGGCGCACG TGCGGACGCT GCTCGCGCAC CGGGTCGACG GGCTCATCGT GGTGGGCGCG
ATCCCGGATG CGCGGCCGTC GATCGGACAG CACCTGCCGG TGCCCGTCGT GTACGCGTTG
TCGCCGTCGA CGGATCCGCG GGACACGTCG GTGATCAGCG ATGACGCGCA CGGCGGCCGG
CTCGCGGCGG AGCACGTCGT CGCGGCCGGA CGACGGCGGA TCGCGTACGT GACGGGGAAC
CCGAGCGATC GCGTGGTCCA CGATCGGATC CGCGGTTCGC GCGAGGTCCT GCTCGAGCAC
GGGCTGGACT TCGTGGCCGG CACGCCGGTG TTCGGCGACT GGGCGGAGCG ATGGGGGCGC
GAGGTGGCGC GCCGGCTCCT GCCGTCGATG GGCGAGATCG ACGCCGTCAT CTGCGGCAAC
GACACGCTCG CCCGCGGCGT GCAGGACGTG TTGCGAGCCG AGGGGATCCG GGTGCCGGAG
GACGTGTCGG TGGTGGGGTT CGACAACTGG GAGATCGTCG CGGCGAACGC CGACCCGGCG
ATCACCTCGG TGGACATGAA CCTGGTGGAG ATCGGTCGGC GGAGTGCCCA CGCGCTCGAT
CGCGCGGGAG GGGCCACGGG GAGTGGGGTC GAGCTGGTGC CGTGCCGGCT GGAGGTGCGG
GCGTCGAGCC TGGCCTGA
|
|---|
| Protein sequence | MGDAGVPAAD AAAGRRASTL KDVARLAGVS VGTASRALND RAEVSAATKQ KVRSAAERLS
FYPNALATGL LRGRTKSIGL LTGDVNGRFS IPILMGLEDA FGVGEMSVLM CEGRGDPERE
AAHVRTLLAH RVDGLIVVGA IPDARPSIGQ HLPVPVVYAL SPSTDPRDTS VISDDAHGGR
LAAEHVVAAG RRRIAYVTGN PSDRVVHDRI RGSREVLLEH GLDFVAGTPV FGDWAERWGR
EVARRLLPSM GEIDAVICGN DTLARGVQDV LRAEGIRVPE DVSVVGFDNW EIVAANADPA
ITSVDMNLVE IGRRSAHALD RAGGATGSGV ELVPCRLEVR ASSLA
|
|---|
| |