Gene Bcav_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1456 
Symbol 
ID7860925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1659299 
End bp1660159 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content65% 
IMG OID643865543 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002881476 
Protein GI229819950 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTCCA CCCGGACTCC GCTGGGGACT GTGCTCGCCG TCCTCCCGCT CGCCGTCTTC 
GGCATCTACG TGCTCCTGCC GGTGTACTGG CTCCTGGTCA ACGCCACCAA GTCCACGCCT
GACTTGTTCT CCACGTTCGG GTTCTGGTTC TCCGACGACC CGCAGTTCTG GCAGAACGTG
CGTGACGTCT TCTCGCAGGA CGACGGGATC TTCGCCCGGT GGATGGTCAA CACCGTCTGG
TACGCCGCGG CGTCGGCGTT CTTGTCGACG CTGCTCGCCC TCATGGCCGG GTACGCCTTC
GCCAAGTGGC GGTTTGTCGG CCGGGACGCC CTGTTCTGGG TCGTGCTGGC GGCCATCATG
ATTCCTGGCG CAGCACTCGC GGTACCCACA TACCAGCTGG TGTCGGAGCT TGGGCTGATC
AACACGTCGT GGGCAGTGAT CCTGCCGTCG ATCGTGAGTC CGTTCGCGCT GTACATGCTG
CGTGTCTACA TCGACGGCGC CGTCCCGGAC GAGCTCATCG ACGCCGGACG GATGGACGGC
GCCGGAGAGA TGCGCATCCT GCGCAGCGTG GTGCTGCGCA TCGTGACGCC GGGGGTAGCC
ACGGTGGCGC TGGTCGCGTT CGTCGGCTCG TGGAACAACT ATCTCCTTCC CCTGCTCGTG
CTCTCCGATC CCGAGCTGTA CCCGGTCACG CTCGGACTGA CGAGCTGGAA CCGCCAGTCG
CTCTTCCCGA GCATCGGCTC CGAGGTCCTC TACAACGCCG TCGTCACCGG CTCATTGCTC
TCGATACTTC CGCTCACGAT CGCCTTCGTG TTCATGCAGC GCTACGTGCG CAGCGGACTC
ACGCTCGGCG CCGTCAAGTA A
 
Protein sequence
MRSTRTPLGT VLAVLPLAVF GIYVLLPVYW LLVNATKSTP DLFSTFGFWF SDDPQFWQNV 
RDVFSQDDGI FARWMVNTVW YAAASAFLST LLALMAGYAF AKWRFVGRDA LFWVVLAAIM
IPGAALAVPT YQLVSELGLI NTSWAVILPS IVSPFALYML RVYIDGAVPD ELIDAGRMDG
AGEMRILRSV VLRIVTPGVA TVALVAFVGS WNNYLLPLLV LSDPELYPVT LGLTSWNRQS
LFPSIGSEVL YNAVVTGSLL SILPLTIAFV FMQRYVRSGL TLGAVK