Gene Bcav_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1449 
Symbol 
ID7860918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand+ 
Start bp1652602 
End bp1653264 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content76% 
IMG OID643865536 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002881469 
Protein GI229819943 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCA TGGCGCAGCC CGGAACGTTC GAGCCGGAGT CGGAGCGCGT CACGCGCGTG 
CTGCGTGACG AGATCCTCGA CGGCGTCCGC GCGCCCGGGA GCAAGCTCGT CGAGCGCGAC 
CTCGCGGCCG ATCTCGGCGT CAGCCGCGTG CCGGTGCGCG ACGCCCTCCG GGCGCTGGTC 
GCCGAGGGGC TCGTGACGCC GCGGCCGCGC ACCTGGGCGG TGGTGCGGGA GTTCACGGCG 
TCCGACGTCG CCGACCTCAC CGAGGTGCGG TCCGCGTTCG AGGTGCTGAC GTTCCGCCTC 
GCGGCGCAGC GTCGCACGGC TGACGGGCTC AGCCGCCTGC GAGCGGTGCT CGACGCGGAG 
CTCGGCGCTG CTCGCACGGG GGACGCCGTC GCCGCCCACC GTGCCGCTGC CGACTTCCAC 
GAGGCGGTGA CGGCGCTCGC GGCCAACGAG CTGCTCGGCG AGCTCGAGCG CACGCTGCGC 
AGCCGGATGC GCTGGCTGCT CGGTCAGCAC GACGACCTCA TCGGTGTCGC GCGTGAGCAC 
GAGGAGCTGT TCGGCGCGAT CGAGGGCGGC GACGTCGCAC GGGTGGAGGA GCTCGTCGTC 
GCGCACCTGG AGTCGGGCCG GGCGGCGGCC GCGGGGCGGG TCGGGGCGGT GCCCGGGGAC 
TGA
 
Protein sequence
MGAMAQPGTF EPESERVTRV LRDEILDGVR APGSKLVERD LAADLGVSRV PVRDALRALV 
AEGLVTPRPR TWAVVREFTA SDVADLTEVR SAFEVLTFRL AAQRRTADGL SRLRAVLDAE 
LGAARTGDAV AAHRAAADFH EAVTALAANE LLGELERTLR SRMRWLLGQH DDLIGVAREH 
EELFGAIEGG DVARVEELVV AHLESGRAAA AGRVGAVPGD