| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1444 |
|---|
| Symbol | |
|---|
| ID | 7860913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 1645799 |
|---|
| End bp | 1648456 |
|---|
| Gene Length | 2658 bp |
|---|
| Protein Length | 885 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643865531 |
|---|
| Product | helicase domain protein |
|---|
| Protein accession | YP_002881464 |
|---|
| Protein GI | 229819938 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4581] Superfamily II RNA helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGA CGGACGGCGC GACGACGCCG GGAGCTCAGG GGCCGCCGTC GGGCACCGCA
CCGGCCACCG CAGCCCGCCA TCCGCTGGCG CTGCCGGCCG GCACCACCCC GGACGACGCC
TACGCCGCGT TCGAGGCGCA CGCGCACGCT CAGGGCCTCG TGCTGTACCC CCACCAGGAG
GAAGCAGCAC TCTCCCTCGC GGCGGGCGAG CACGTGATCC TCGCGACGCC GACGGGCTCC
GGGAAGTCAC TCGTCGCCGT CGCCGCGCAC GCGGTCGCCC TCGCCCGCGG CGCCCGCACC
TACTACACGG CACCCATCAA GGCGCTCGTC AGCGAGAAGT TCTTCGACCT CGCCGCGACG
TTCGGCGCCC ACCAGGTCGG GATGATCACC GGCGACGTCG CCATCAACCC CACCGCGCCC
ATCATCTGCT GCACCGCGGA GATCCTCGCC GCGCAGACGC TTCGCGGGGA CCTCGCGGCG
ACGCCCACCA GCACGGAGAA CGACGCGGAC GTCGTGGTCG TGGCCGACGA GTTCCACTTC
TACGCCGACC CGCAACGCGG CTGGGCCTGG CAGGTGCCGC TCCTCGATCT GCCCGGCGCC
CAGTTCCTGC TCATGTCGGC GACGCTCGGC GACATGACGG CCATCGCGGC GGACGTCGCG
CGACGCACCG GCCGGGACGT CGCCACCGTC ACGCACACCG AACGGCCCGT ACCGCTCACG
TACACCTACT CGCTCGAACC CCTCCAGGAG CTCCTCGTCG AGCTGCTCGG GACGCACCGG
GCGCCGGCCT ATGTCGTCCA CTTCACCCAG GCCGCGGCGC TCGAACGCGC GCAGGCCCTG
ACGTCGGTCC AGGTGGCGAG CCGCGCCCAG CGGGACGCGA TCGCCGCCGC CCTCGACGGC
GAACGGTTCG CCACCGGCTT CGGGCGCACC CTGTCCCGGC TGTTGCGTGC CGGCATCGGC
GTCCACCACG CCGGCATGCT GCCGCGCTAC CGCCGCCTCG TGGAGCGCCT CGTGCAGGCC
GGCCACCTCC GGATCGTGTG CGGCACCGAC ACGCTGGGCG TCGGCGTCAA CATGCCGATC
CGCACCGTCG TGTTCACGGG CCTGACGAAG TTCGACGGCG AGCGCAGCCG GCACCTGAGC
GCCCGCGAGT TTCACCAGAT CGCCGGCCGG GCGGGCCGTG CGGGCCACGA CACCATGGGC
GACGTCGTCG TCGAGGCACC CGAGCACGTC ATCGAGAACG CCAAGGCGCT CGCGAAGGCC
GGCGACGACG AGCGCAAGCG CCGCAAGATC GTCCGGAAGA AGGCACCCGA CGGCGTCGTC
AACTGGACCG ACAAGACGTT CGAGCGGCTG CGCGACGCGG ACCCGGAGCC GCTCACGAGC
CAGTTCCGGG TGACGCACGC GATGGCGCTC GGCGTCCTCG CCCGCCCCGG TGACCCCGTC
GCTCGCATGG CGCGCCTCCT CACCGACAAC CACGAGCCGG AGCGCCCCGC GAACCCGCAC
GTGCGCCGCG CCGTCGGGAT CTACCGCTCG CTCAAGGCGG CCGGGATCGT GCGGCACGTC
TCCTCGCGCC AGGCGGCCGA CGACGGCGGA CCGCGCCTGC GGCTCGTCGC CGACGTGCCG
AGCGAGTTCG CGCTCAACGC CCCGCTGTCC CCGTTCGCGC TCGCGGCGTT CGACCTGCTC
GACCCCGAGC AGGACGAGTT CACCCGCGCG CTCGACGTCG TCTCCGTGGT CGAGGCGACG
ACGCCCGGCC CGCGCCCGCT GCTCGTCGCG CAGGAGAGGG CCGCGCGCGG CGAGGCGATC
GGCGCGATGA AGGCCGACGG CCTCGACTAC GAGGAGCGGA TGGCCGCACT CGAGGACGTC
ACGTACCCGC AGCCGCTCGC CGAGCTCCTC GGCGCCGCCA TGACGGCGTA CGCCCGGGCC
CACCCCTGGG TGTCGGAGTG GGAGCTCCAG CCGAAGTCGG TCGTGCGCGA GATGGTCGAG
ACCGGGATGA CGTTCTCCGA GCTGGTCTCC CGGTACGGGC TCGCGCGCAG CGAGGGCGTC
GTCCTGCGGT ACCTCAGCGA GGTGTACCGC ACGCTGCGGC AGGTGGTGCC GTCGTCGGCC
CGGACCACGG AGGTCGACGA CGTCGTCACG TGGCTGGGCG AGGTCGTGCG GCAGGTCGAC
TCCTCGCTGC TGTCGGAGTG GGAGGCCCTC ACCGAGGTCG CGAGCGAGGC CGCGGACGGG
CTCAGCGACG CCGAGGTGGA CCGCGCCGAA CGCCGGTTCG GCGACGCCGA GGCGCCCGCT
CCGCTCTCCG CCAACACGCG CGCGCTGCGC ATCGCCGCCC GCGGAGCCGC GATGCGCAGG
GTGGAGCTCC TCGCCCGCGA GGCGTACGGC GAGCTCGGCG CCCTCGACGG CGACTCCGGC
TGGGACGCGC AGCGGTGGGC GAGCGCGTTC GAGCCCTACT GGTCGGAGTA CGACGACGTC
GGTACGTCCG GTCCGGCGAG GTCGGCGGCC CTCGTCCTGC TCGACGAGGC GGCCGGACCC
CGGACCTGGC GCCTCACCCA GATCCTCGAC GACCCCGACG GCGACCACGA CTGGCGCCTC
GAGCTCGAGG TCGACCTCGA CGCCAGCGAC GACGCCGGCG AGATCGTGGT CCGCCCGGCC
TCGCTCGGTC CGCTCTGA
|
|---|
| Protein sequence | MTTTDGATTP GAQGPPSGTA PATAARHPLA LPAGTTPDDA YAAFEAHAHA QGLVLYPHQE
EAALSLAAGE HVILATPTGS GKSLVAVAAH AVALARGART YYTAPIKALV SEKFFDLAAT
FGAHQVGMIT GDVAINPTAP IICCTAEILA AQTLRGDLAA TPTSTENDAD VVVVADEFHF
YADPQRGWAW QVPLLDLPGA QFLLMSATLG DMTAIAADVA RRTGRDVATV THTERPVPLT
YTYSLEPLQE LLVELLGTHR APAYVVHFTQ AAALERAQAL TSVQVASRAQ RDAIAAALDG
ERFATGFGRT LSRLLRAGIG VHHAGMLPRY RRLVERLVQA GHLRIVCGTD TLGVGVNMPI
RTVVFTGLTK FDGERSRHLS AREFHQIAGR AGRAGHDTMG DVVVEAPEHV IENAKALAKA
GDDERKRRKI VRKKAPDGVV NWTDKTFERL RDADPEPLTS QFRVTHAMAL GVLARPGDPV
ARMARLLTDN HEPERPANPH VRRAVGIYRS LKAAGIVRHV SSRQAADDGG PRLRLVADVP
SEFALNAPLS PFALAAFDLL DPEQDEFTRA LDVVSVVEAT TPGPRPLLVA QERAARGEAI
GAMKADGLDY EERMAALEDV TYPQPLAELL GAAMTAYARA HPWVSEWELQ PKSVVREMVE
TGMTFSELVS RYGLARSEGV VLRYLSEVYR TLRQVVPSSA RTTEVDDVVT WLGEVVRQVD
SSLLSEWEAL TEVASEAADG LSDAEVDRAE RRFGDAEAPA PLSANTRALR IAARGAAMRR
VELLAREAYG ELGALDGDSG WDAQRWASAF EPYWSEYDDV GTSGPARSAA LVLLDEAAGP
RTWRLTQILD DPDGDHDWRL ELEVDLDASD DAGEIVVRPA SLGPL
|
|---|
| |