Gene Bcav_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1440 
Symbol 
ID7860909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1641609 
End bp1642784 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content75% 
IMG OID643865527 
ProductExo-alpha-sialidase 
Protein accessionYP_002881460 
Protein GI229819934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.721919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTCC TTCCTGTCGT CGCCCTCGGC GCGTCCCTCG CGCTGCTGTC CACCGCGCCT 
CCCGCCACCC CGGCGCCCGA CACGACCACA CCCGAGCACA TCGTGCTCTT CGAGCAGGGG
AGGGGCGGAT ACGAGTGCTA CCGCATCCCC GCGATCGTCC GGACGTCGGA CGGCGGGCTC
CTCGCGTTCG CGGAGGGCCG CCGACCCGCC ACGCACACGA CCGCCTGGTG CCACGACGCC
GCACCCATCG ACGTCGTCGT CCGGCGGTCG GATGACGACG GCGTCACGTG GGGTCCCGTG
TCGGTGGTCC TGTCGGGCGA TCCCGCCGGC GGCGACGAGG AGGCGACCCG GGGGAACCCG
GCGCCGGTCG TCGTCACGCG CGGCGAGCAC GCCGGGCGCA TCGTCCTCGT CACCACGCAC
AACCCGGCCG GCGGAGGAGT GCGCACGCCG TACGTGCAGA CGAGCGACGA CGACGGTCGC
ACGTGGAGCG AGGCGACGTC GCTCGCTCAC CTCCCGCCGG ACGGGACCGG TTGGTATGCG
ACGGGCCCGC AGCACGGGAT CCAGCTGACG AGCGGCCCGC ACCGCGGCCG GCTCGTCGTG
GGCGTCAACT ACGACGCCGG AGGCGTGAGG TTCGGCGGGC TGCTCCTCAG CGACGACGGC
GGCGACACGT GGCGTGCGGG CGCCGCGGCG GCGGCGGTCG ACCCGGCGGA CATCCCGCAG
GAGCTCGGCG TGGTCGAGAC CCCGGGCGGC GGCGTGCTCG CCGTCGCCCG CAACCAGAAC
GCCGCGGGTG CGCACCAGCG CCTCGCCGCC CGGAGCGGCG ACGGCGGCGC GACGTTCGGA
GGGCAGTTCA CCGGCGTGGC GGACCTCGTG ACGACGCCCC GGGTGCAGGG ATCCGTGCTG
GCGCTGACAC CTCCGGGACG GCCGGGAGCC TCCGGTCCGC TCGTGTTCAG CTCGCCCGTC
GACCCGACGT TCCGGCGCAA TCTCACGCTC TTCCGCTCCG ACGACCACGG GCGCACGTGG
GCGACCCACG CCGTGCTGAC CGCTGACCGG GCCGGCTACA GCGACCTCGT CAGGCTCGGG
GACGGGAGGC TCGGCGTGCT GTACGAGGGT GGCGCCTACC CCGACGGCGA CGCGCGGGAC
GAGATCCGGT TCGTCGCCGT CCGCGTGCCG CGCTGA
 
Protein sequence
MRVLPVVALG ASLALLSTAP PATPAPDTTT PEHIVLFEQG RGGYECYRIP AIVRTSDGGL 
LAFAEGRRPA THTTAWCHDA APIDVVVRRS DDDGVTWGPV SVVLSGDPAG GDEEATRGNP
APVVVTRGEH AGRIVLVTTH NPAGGGVRTP YVQTSDDDGR TWSEATSLAH LPPDGTGWYA
TGPQHGIQLT SGPHRGRLVV GVNYDAGGVR FGGLLLSDDG GDTWRAGAAA AAVDPADIPQ
ELGVVETPGG GVLAVARNQN AAGAHQRLAA RSGDGGATFG GQFTGVADLV TTPRVQGSVL
ALTPPGRPGA SGPLVFSSPV DPTFRRNLTL FRSDDHGRTW ATHAVLTADR AGYSDLVRLG
DGRLGVLYEG GAYPDGDARD EIRFVAVRVP R