Gene Bcav_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1392 
Symbol 
ID7861692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1584358 
End bp1585089 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content69% 
IMG OID643865476 
Producthypothetical protein 
Protein accessionYP_002881413 
Protein GI229819887 
COG category[S] Function unknown 
COG ID[COG4330] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00205687 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.215484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC AGGCGATCGC CGTCGGTGGC CTCGGCGTCC TGGCGCTCAA CGTCTACGCC 
GTCGTCCTGA TCGTCGTCCG TTCCCGCGCG TGGGGGACGC GCCTGTACCG ACCGATGCTG
CTCAACGTCG CGCTGTCGAC GATCCCGATC CTGCTCGCGA TCGGGATGAT CGTGGGCACG
CTCGTGCTGC TCGCCGCGGA ACCCGGTCGC GTGCGGCTGC CCGTGGCGTA CCTCATCGTC
AGCGGGCTGG CGTTCGTCGT CTTCTTCCCG AACTCCGTGT ACCTGATCAC CGAGCTGAAC
TTCTCCCACC GACGCTCGGA CGATGCCGTC CCGTTGTGGT TCGACATCGT GATGACGCTG
ACGCTCACCC TGTCGGGGAT CGTCAACGCC ATCGTGGCGC TGGCGTTCGT GCAGACGTTC
GCCATCGTGT TCCGGGCCGC GGGAGAGATC CCGGCCACGC CGCCGTGGTG GTCGTGGGCG
GTGACGGCGG GGGTGCTCGT GCTCGGCTGC CTCGGCGTCT ACCTCGGCCG CCGCCTGAGG
TTCAACAGCT GGGACGCGGC CCGCCCGTGG CTCGTGGTGA GCCGGCTGGT CGCGTACCTG
CGGCCGCGGG GCCGGATGCG TGAGCTGGTC CGCTTCGTCG GCGCGCACGC GGTGCTCCTC
GTCGTCCTGT ACGTGATGGT CTACTTCCCG ATCTACGTGC TGGTCATCGG GTGGGCGCTC
GACTCGGGCT GA
 
Protein sequence
MIGQAIAVGG LGVLALNVYA VVLIVVRSRA WGTRLYRPML LNVALSTIPI LLAIGMIVGT 
LVLLAAEPGR VRLPVAYLIV SGLAFVVFFP NSVYLITELN FSHRRSDDAV PLWFDIVMTL
TLTLSGIVNA IVALAFVQTF AIVFRAAGEI PATPPWWSWA VTAGVLVLGC LGVYLGRRLR
FNSWDAARPW LVVSRLVAYL RPRGRMRELV RFVGAHAVLL VVLYVMVYFP IYVLVIGWAL
DSG