Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1390 |
Symbol | |
ID | 7861690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1582750 |
End bp | 1583637 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643865474 |
Product | ABC-3 protein |
Protein accession | YP_002881411 |
Protein GI | 229819885 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0078855 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.217794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCATG TGATCGACGT GCTCGTCGAC CCGCTCGCGC TCGGCCTCAT GCAGCGCGCG TTCCTCGTGA CGGCGGCCGC AGCGATCGTG TGCGCGCTCC TGTCGTGCTG GCTCGTCCTC ATCGGCTGGT CGCTCATGGG GGACGCGCTG TCGCACGCCG TGCTCCCCGG GGTCGTGCTC GCGTACGTCG TCGGCGTCCC GTTCACGCTC GGCGCCCTCG CGTTCGGCCT CGCGGCCGCG GGGCTGATCG GCGTCGTCCG CGACCGGACG CGCCTGGCGG AGGACGCCGC CATCGGCGTG GTGTTCACGA CGTTGTTCGC GCTCGGTCTC GTGCTGGTCT CGCTCAACCC CGCCCAGGTC GACCTCCAGC ACATCCTGCT CGGCAACGTG CTCGGCGTCT CCGTCGCCGA CACGATCCAG GTGCTCGCGC TCGCGGCCGT CACGACGACG GTGCTCCTGG TCAAGCGGCG CGACCTCACG CTGTACGCGT TCGACCCGAC GTACGCGCAC GCGATCGGCC TGTCCCCGCG CCGGATCGCG GCACTGCTGC TCGGGCTGCT GGCGCTGACG ATCGTCGTCG CGCTCCAGGC GATCGGCGTC ATCCTCGTCG TCGCGATGCT CGTGATCCCC GGCGCGACGG CGCGGCTGCT CACGGAGCGC TTCGGCGTCA TGCTCGTCGT GGCTCCGGCG ACGGCGCTGG CCTGCGCGGT CGTCGGCCTG TACCTCAGCT ACTACGCGGG TGTCTCGAGC GGCGGAGCGG TGGTCCTCGC CCAGGGTGTG CTCTTCGGCG TCGTCGCCCT CGTGACCCAG CTGCGCCGCC GACGCCCGGC GGGCGGGCCG ACGGCGCACG CTGCCTCCGC CGAGGCGGCC CTACGCTCGG GGGTATGA
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Protein sequence | MSHVIDVLVD PLALGLMQRA FLVTAAAAIV CALLSCWLVL IGWSLMGDAL SHAVLPGVVL AYVVGVPFTL GALAFGLAAA GLIGVVRDRT RLAEDAAIGV VFTTLFALGL VLVSLNPAQV DLQHILLGNV LGVSVADTIQ VLALAAVTTT VLLVKRRDLT LYAFDPTYAH AIGLSPRRIA ALLLGLLALT IVVALQAIGV ILVVAMLVIP GATARLLTER FGVMLVVAPA TALACAVVGL YLSYYAGVSS GGAVVLAQGV LFGVVALVTQ LRRRRPAGGP TAHAASAEAA LRSGV
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