Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1389 |
Symbol | |
ID | 7861689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1581998 |
End bp | 1582753 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643865473 |
Product | ABC transporter related |
Protein accession | YP_002881410 |
Protein GI | 229819884 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0369589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.478115 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGCA CGCTCGAGGT GCGCGGCGCC GTCGTCCGCT ACGGCGACGT GACGGCGCTC GACGGGGCGG ACCTGACCCT CGTGCCCGGC CGGATCACCG GCCTGGTGGG CACGAACGGC TCGGGCAAGT CCACGCTGTT CAAGGCGATC ATGGGGCTGG TCCCGCTCGC TGGTGGCGTC GTGACGTACG ACGGCGCGCC GCTCGCGCGT GCCCGGCGGC GCGGGGTGCT GGGCTTCGTC CCGCAGTCGG AGGAGGTCGA CCAGGGTTTC CCGCTCGCGG TGCGCGACGT CGTCGCCATG GGCAGGTACG CGGGGCTCGG GCCTACCCGG CGACTGCGCG CACCCGACCA CGCCGCCCTC GCCGAGGCGC TCGACGCCGT CGACCTGGAG GACCTCGCCC ACCGCCAGAT CGGGCGACTC TCGGGCGGCC AGCGCAAGCG GGCGTTCGTC GCCCGCGTGC TCGCCCAGCG CGCGCAGGTC CTGCTGCTCG ACGAGCCGTT CGCGGGCGTC GACGTCGTCA GCGAGCGCAC GATCTCGCGG GTCCTCCGCC AGCGGGCCGA CGACGGCGCG GCGGTGCTGA TCGCGAGCCA CGACCTCGTC GCGCTCCCGG GTCTCGCGGA CGACGCGGTG CTGCTCCAGC GGCACGTCGT CGCGCGCGGC ACCCCGGCCG AGGTGCTGGC CCCCGAGGTG CTGGCTCGCG TGTTCGTCGA GTCCGAGGAG CGGCGCGAGG TGCCGGGCGT GGGGGCGCGG GGATGA
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Protein sequence | MSGTLEVRGA VVRYGDVTAL DGADLTLVPG RITGLVGTNG SGKSTLFKAI MGLVPLAGGV VTYDGAPLAR ARRRGVLGFV PQSEEVDQGF PLAVRDVVAM GRYAGLGPTR RLRAPDHAAL AEALDAVDLE DLAHRQIGRL SGGQRKRAFV ARVLAQRAQV LLLDEPFAGV DVVSERTISR VLRQRADDGA AVLIASHDLV ALPGLADDAV LLQRHVVARG TPAEVLAPEV LARVFVESEE RREVPGVGAR G
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