Gene Bcav_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1389 
Symbol 
ID7861689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1581998 
End bp1582753 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content76% 
IMG OID643865473 
ProductABC transporter related 
Protein accessionYP_002881410 
Protein GI229819884 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0369589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.478115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCA CGCTCGAGGT GCGCGGCGCC GTCGTCCGCT ACGGCGACGT GACGGCGCTC 
GACGGGGCGG ACCTGACCCT CGTGCCCGGC CGGATCACCG GCCTGGTGGG CACGAACGGC
TCGGGCAAGT CCACGCTGTT CAAGGCGATC ATGGGGCTGG TCCCGCTCGC TGGTGGCGTC
GTGACGTACG ACGGCGCGCC GCTCGCGCGT GCCCGGCGGC GCGGGGTGCT GGGCTTCGTC
CCGCAGTCGG AGGAGGTCGA CCAGGGTTTC CCGCTCGCGG TGCGCGACGT CGTCGCCATG
GGCAGGTACG CGGGGCTCGG GCCTACCCGG CGACTGCGCG CACCCGACCA CGCCGCCCTC
GCCGAGGCGC TCGACGCCGT CGACCTGGAG GACCTCGCCC ACCGCCAGAT CGGGCGACTC
TCGGGCGGCC AGCGCAAGCG GGCGTTCGTC GCCCGCGTGC TCGCCCAGCG CGCGCAGGTC
CTGCTGCTCG ACGAGCCGTT CGCGGGCGTC GACGTCGTCA GCGAGCGCAC GATCTCGCGG
GTCCTCCGCC AGCGGGCCGA CGACGGCGCG GCGGTGCTGA TCGCGAGCCA CGACCTCGTC
GCGCTCCCGG GTCTCGCGGA CGACGCGGTG CTGCTCCAGC GGCACGTCGT CGCGCGCGGC
ACCCCGGCCG AGGTGCTGGC CCCCGAGGTG CTGGCTCGCG TGTTCGTCGA GTCCGAGGAG
CGGCGCGAGG TGCCGGGCGT GGGGGCGCGG GGATGA
 
Protein sequence
MSGTLEVRGA VVRYGDVTAL DGADLTLVPG RITGLVGTNG SGKSTLFKAI MGLVPLAGGV 
VTYDGAPLAR ARRRGVLGFV PQSEEVDQGF PLAVRDVVAM GRYAGLGPTR RLRAPDHAAL
AEALDAVDLE DLAHRQIGRL SGGQRKRAFV ARVLAQRAQV LLLDEPFAGV DVVSERTISR
VLRQRADDGA AVLIASHDLV ALPGLADDAV LLQRHVVARG TPAEVLAPEV LARVFVESEE
RREVPGVGAR G