Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1370 |
Symbol | |
ID | 7861670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1566156 |
End bp | 1566827 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643865454 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002881391 |
Protein GI | 229819865 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.705116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCA CCCCCGTCCG CACGCTCGGC CACGACGCGA TCGTGGCCGC CGCCGTCGAG CTCGCCGACG CCCAGGGCAT CGACGCCGTC TCGATGCGCC GTGTCGCCGA GCAGCTCGGC GCGGGCACGA TGTCGCTGTA CCGCCACGTC GCGACGAAGG ACGAGCTCGT CGCGGCGATG GTGGAGCGAG TCACCGACGC CTACGCGTAC CCCGACCCGG CCGGCATGGA CTGGCGGGCA CGGATGCACG CCATGGCCCG GCGCGAGTGG GACATGTACG TCGAGCATCC GTGGGTGCTC GTGGTGCTGG CGACGGCGAC GCCGCCGTTC GGCCCGGCGT CGTTCCGCGC GATGGAGTGG GCGCTCGCCG CGCTCGAGCC GCTCCGCCTC GCTCCCGAGG ACGCCGGTGC CGCGATCATG ACGGTGACGA ACTACCTCCA GGGGAGCGCG CGAGTCGTCC TCGGGCGTCC GCAGCGCGAC GACGCCGAGG AGCTGCTGGA GAGCGTCGAC CCAGGAACGC TGTGGCGCGA ACGGCTGTCG GCGGTCGAGC TGGCCGACTA CCCGCGGCTG CGGGCCCTCA TCTCGTCACC GTTCCTGCGG GATCCCGCCG CGTGGTTCGA GAACGGCCTC GACGTCGTGC TGGACGGCGT CGCCGCGCGC GCCCGCTCCT GA
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Protein sequence | MPRTPVRTLG HDAIVAAAVE LADAQGIDAV SMRRVAEQLG AGTMSLYRHV ATKDELVAAM VERVTDAYAY PDPAGMDWRA RMHAMARREW DMYVEHPWVL VVLATATPPF GPASFRAMEW ALAALEPLRL APEDAGAAIM TVTNYLQGSA RVVLGRPQRD DAEELLESVD PGTLWRERLS AVELADYPRL RALISSPFLR DPAAWFENGL DVVLDGVAAR ARS
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