| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1350 |
|---|
| Symbol | |
|---|
| ID | 7861650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 1542325 |
|---|
| End bp | 1543536 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643865434 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_002881371 |
|---|
| Protein GI | 229819845 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.763813 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAAT CGGAGGTGGC CGTGGCGCCG ACGCGCGACC GGACGCTCCC GGGCACCGAG
ACCGGGCCCG GCGGTCTGCT GCAGCTCCTG CGCGACGGCC GGGCACGGAC CCGCGCCGAC
CTGGTGGCCG AGACCGGTCA GTCGCGGTCG ACGATCGCGA CCCGTGTCGA CGCGCTCCTC
GCGACCGGCC TGGTGGCCTC GGTCGGTTCG CGCGCGTCCA CGGGCGGCCG CCCGCCCACG
GCGTTCGCGT TCGACCCGAC GTCCCGGGTG GTGCTCGGGG TCGACCTCGG CGCCGCCCAC
GGCCGCCTCG CCGTGACCGA TCTCGCCGGC TCGATCCTCG CCGAGCACGC CGAGCCGGTG
CGGATCTCCG ACGCCCCCGA GAAGGTGCTC GGCTGGGTGG CGCGGACCGG GCACGAGCTC
CTCGACCGGG CCGGACGCCC GAGCACCGAC CTCGCCGGAC TCGGTCTGGG GCTGCCCGGA
CCCGTCGAGC ACTCCACGGG CCGACCCGTC GACCCGCCGA TCATGCCCGG CTGGCACGGC
GTCGACGTGC CCGGGATCCT CGGCGCGCAC TTCGCGGCGC CGATCCTGGT GGACAACGAC
GTCAACCTCA TGGCGCTGGG CGAGCACGCC ATGGGTTTCC CCGACGTCGA CGACCTGCTG
TTCGTCAAGG TGGCGACGGG CATCGGGGCC GGCATCATCG CCGACGGCGA GCTGCGCCGC
GGCGCGCAGG GAGCGGCCGG GGACCTCGGG CACATGGCGG TGCCCGGCGG CGAGCCGCGG
TTGTGCACCT GCGGCAACAC CGGGTGCGTG GAAGCGCTGG CGAGCGGCAA CGCGATCGCG
ACGAAGCTGC GCGAGGCGGG GATCGACGCC ACGACGAGCG ACGACGTCGT CGCGCTGGTC
CGCGCCGGCG ACCCGACCGC CACGGCGACG CTCCGCCAGG CGGGGCGCGA GCTGGGCGCG
GTGCTGGCGG GCACGGTGAG CCTGCTCAAC CCGTCCGTCG TCGTCATCGG CGGCAGCCTC
TCGGCGGCGG GCGAGCAGCT GCTCGCGGGG ATCCGCGAGG TGGTGTACGC GCGGTCGCTG
CCGCTGGCGA CGCAGCACCT GCAGATCGTC GGCACACGGA CGGCGCGCCA GGCGGCGGTG
CTCGGTGCGA GCGTGCTGGC GAGCGACTTC GCGCTCAGCA CGGCGCGCAT CGACGCCCTC
ACCGCCCCCT GA
|
|---|
| Protein sequence | MVESEVAVAP TRDRTLPGTE TGPGGLLQLL RDGRARTRAD LVAETGQSRS TIATRVDALL
ATGLVASVGS RASTGGRPPT AFAFDPTSRV VLGVDLGAAH GRLAVTDLAG SILAEHAEPV
RISDAPEKVL GWVARTGHEL LDRAGRPSTD LAGLGLGLPG PVEHSTGRPV DPPIMPGWHG
VDVPGILGAH FAAPILVDND VNLMALGEHA MGFPDVDDLL FVKVATGIGA GIIADGELRR
GAQGAAGDLG HMAVPGGEPR LCTCGNTGCV EALASGNAIA TKLREAGIDA TTSDDVVALV
RAGDPTATAT LRQAGRELGA VLAGTVSLLN PSVVVIGGSL SAAGEQLLAG IREVVYARSL
PLATQHLQIV GTRTARQAAV LGASVLASDF ALSTARIDAL TAP
|
|---|
| |