Gene Bcav_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1349 
Symbol 
ID7861649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1540399 
End bp1542279 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content71% 
IMG OID643865433 
Producthypothetical protein 
Protein accessionYP_002881370 
Protein GI229819844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.305639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA TCATCCTGAC GCGTCAGGGC TTCCTGCGGA TGAGCGGCGC CCTCGGTGGC 
GCCGTCGCCG CGGTCGGAGC ATTCGCCGGC CCCGCCGGTG CGCACGTCCG GCGCGAGCCG
GCGGCCGCCG GTTCCGGCGG ACCGCTGCTG GCCGACGAGA CGTTCCCCAT CGGCGTGTTC
TGGCCGCCGC CGCCCCTGCA GACGACGCTC GAGCGCTGGC AGGAGATGGC CGACGCCGGG
TTCACGTACG TCCACTCGAA CAACTACCTG TACGCGGACC ACTACATCCA GCGGCACGCG
TTGGGCATCG CGGACCAGGT CGGGCTCAAG GTGCTCGTCG ACGACGGCGA CGTGCGCTGG
CTCACGCACC AGTTCACGAT CTCCGACGAC GGCGGGGCCT TCACGCTCAC GCGCGCCGAG
GCGGAGACGA AGCTGCGCGA GGTCATCCGC AAGTACGCCG GCGACGGCTT CTGGCAGATC
GTCGACGGCC GCCTGCTGTT CGACGGCGGC ACCGGGAACG GCTCGATCGG GTGGACCCTC
GACGGCGCCG AATGGACCGA CTACACGTTC GAGTTCGACA CCGCCCCGCG GGCGACGGGC
GCCGGCGGCT ACGCGCAGGC CGGGTGGGCG TTCCGCGTCC AGGACGAGGG CAACGCGTAC
GTCTGGCTGC TCACCAACCG CCCGGCCGAC GGGGCGCCGT CAGCGCTGGT CAAGGCGGTC
TTCGTGGGCG GCGCGCCGCA GGTGACGACG ACGCTGCTGC CGTTCGCCGT CGTCCCTGAC
CAGACCTACC GCGTGGCGAC CACGCTGGAG GGTGACACGA TCACGACGAC GATCGACGGC
GTCGTCGTCG ACACGACGAC GGACGCGACG TTCGCCTCCG GACCGGTCGG GTTCCGTGAG
GCGGGGTCGG AGTCGGCGTT CTTCGACGAC GTCGTGGTCA CGGCGCCGGA CGGCGAGGTG
CTGTTCACCG AGGACTTCGC GTCCGATCTC GGGGCGTGGC GGCGTCCCGG CGGCGGCTTC
GCCAGCTTCG CCGGACTCCA CGTGTACGAC GAGCCGTCCG TCGCGAAGCT GCCGGACCTC
GCCATCGTGC TCGACATCAT CCGGTCGATC GACCCCGAGT GCCTGCCCTA CGTGAACCAC
CTGCCCGGCT TCGACTACGT GGAGGCGGTC GAGCAGACGA ACCCGGAGGT GCTCTCGTTC
GACAGGTACC CGATCCTGCT CGAGGGCGAG GACGCCGGCT ACTTCCGGAA CTGGGCCGAC
GTCCGGGCGG CGGCGCTGCC GGGCGGGATC CCGACCTGGG CGTACATCCA GTCCGTGGGT
TACACGAACC ACGCCGTGCC CACGAAGGAC GACCTGTACT GGCAGGTCAA CATCAGCCTC
GCGTACGGCT GCAAGGGCAT CCAGTACTTC ACGTACTGGA CGCCGGACCC GGCCCGAGGG
GAGAACTTCA CCGGGGGCAT CATGACGGTG GAGGGGGAGC GAACCCCGCT GTACGACCAC
ACGCGCGAGG TGAACACGCG CTACCTGGCC GCGATCGGCC GGCAGATGCT GCCGCTGACG
TCGACGGCGG TGCAGGCGGC GAACCTCGAT CCGGTACCGG ACGGGCTGGA GCCGTTCGCA
CCGGACGACG ACGTCGAGCA GGTCCGGGGC GACGCCGTCG TCCTCGGCAG GTTCACCGGT
CCGGACGAGC AGCGGTACCT CCTCGTGGCG AACCACTCGC GGCACGAGCG GGCGAACGTG
GGGGTGCGGT GGGGATCCGC CGTCGGTGGG GTCGCGACGT ACGAGCCCGA ACGTGAGCGG
TACCGCGACC GGGGCGACCG CGACCTGAGC CTCCGGCTCG GCCCGGGTCG CGCGACCCTG
GTGCGCATCG AGCCGCGGTA G
 
Protein sequence
MAEIILTRQG FLRMSGALGG AVAAVGAFAG PAGAHVRREP AAAGSGGPLL ADETFPIGVF 
WPPPPLQTTL ERWQEMADAG FTYVHSNNYL YADHYIQRHA LGIADQVGLK VLVDDGDVRW
LTHQFTISDD GGAFTLTRAE AETKLREVIR KYAGDGFWQI VDGRLLFDGG TGNGSIGWTL
DGAEWTDYTF EFDTAPRATG AGGYAQAGWA FRVQDEGNAY VWLLTNRPAD GAPSALVKAV
FVGGAPQVTT TLLPFAVVPD QTYRVATTLE GDTITTTIDG VVVDTTTDAT FASGPVGFRE
AGSESAFFDD VVVTAPDGEV LFTEDFASDL GAWRRPGGGF ASFAGLHVYD EPSVAKLPDL
AIVLDIIRSI DPECLPYVNH LPGFDYVEAV EQTNPEVLSF DRYPILLEGE DAGYFRNWAD
VRAAALPGGI PTWAYIQSVG YTNHAVPTKD DLYWQVNISL AYGCKGIQYF TYWTPDPARG
ENFTGGIMTV EGERTPLYDH TREVNTRYLA AIGRQMLPLT STAVQAANLD PVPDGLEPFA
PDDDVEQVRG DAVVLGRFTG PDEQRYLLVA NHSRHERANV GVRWGSAVGG VATYEPERER
YRDRGDRDLS LRLGPGRATL VRIEPR