Gene Bcav_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1336 
Symbol 
ID7861636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1520220 
End bp1521923 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content71% 
IMG OID643865420 
Producttrehalose synthase 
Protein accessionYP_002881357 
Protein GI229819831 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID[TIGR02456] trehalose synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTCCG CTCCCGACGG CCGCACGGAC GGCGACTGGT ACCGGACGGC TGTCTTCTAC 
GAGGTGCTGC TGCGCTCGTT CTCGGACTCG AACGCCTCGG GCGCGGGCGA CCTGCGCGGC
CTCTCGAGCC GGCTCGACCA CCTCGAGTGG CTCGGGGTCG ACTGCCTGTG GCTGCCCCCG
TTCTACCCGT CGCCGCTGCG CGACGGGGGC TACGACGTCG CCGACTACAC GGCCGTCGCG
CCGGAGTACG GCACGCTCGA GGACGTCCGC GACCTCGTGG CGGAGGTCCA CGCCCGGGGC
ATGCGCGTCG TCGTCGACCT CGTCATGAAC CACACGAGCG ACGCGCACCC GTGGTTCCAG
GCCTCCCGCT CGCACCCCGA CGGCCCGTAC GGCGACTTCT ACGTGTGGCG ACAGGACAAC
ACCGGCTACC CCGACGCGCG GATCATCTTC GTCGACACGG AGACGTCGAA CTGGACGTTC
GACCCGGTGC GCCGGGAGTA CTTCTGGCAC CGGTTCTTCT CGCACCAGCC GGACCTCAAC
TTCGCCAACC CGAAGGTCAA GGAGGCGATG TTCGACGTCG TCCGGTTCTG GCTCGGGACG
GGCGTCGACG GGTTCCGCCT CGACGCCGTC CCGTACCTCT TCGAGGAGGA GGGCACGAAC
TGCGAGAACC TGCCGGCCAC GCACGCGTTC CTCGCCGAGC TGCGGGCGAT GGTCGACGCC
GAGGCGCCCG GCACGCTGCT GGTCGCGGAG GCGAACCAGT GGCCGGGTGA GGTCGTCGAG
TACTACGGCA CGCCCGAGGC GCCGGAGTGC CACATGTGCT TCCACTTCCC GGTGATGCCG
CGGATCTTCT ACGCGCTGCG CGACCAGCGC GCGACGAGCA TCGTCGACAT CCTCGCCGAC
ACGCCGGACG TCCCCGACGG CGCCCAGTGG GGCACGTTCC TGCGCAACCA CGACGAGCTC
ACGCTCGAGA TGGTGTCGAC CGAGGAACGC GCCGCGATGT ACGGCTGGTA CGCGGAGGAC
CCGCGGATGC GCGCGAACGT GGGGATCCGC CGGCGGCTCG CACCGCTGCT CGGCAACTCG
CGCGCCGAGA TCGAGCTGGC GCACGCGCTG CTGCTCTCGC TGCCGGGCAG CCCGTTCCTG
TACTACGGCG ACGAGATCGG CATGGGCGAC AACATCTGGC TGCCCGACCG CGACGGCGTG
CGCACCCCGA TGCAGTGGAC GCCGGACCGC AACGCCGGCT TCTCGACCGC TGACCCCGGG
AAGGTCCACC TGCCGCTCGT CCAGTCGCTC GTCCACCACT ACGCCGCCGT CAACGTCGAA
GCGCTGACGG CCCAGTCGAC GTCGCTCCTG CACTGGCTCC GGGGCATGCT CGAGGTCCGT
CGGCGGCACC CGGTGTTCGG GCGCGGCGAC CACGAGGCGC TCGCCAGCGA CAACGACGCC
GTCCTCGCGT TTCTGCGCCG CGACGAGAGC GAGACCGTGC TGTGTGTCGC GAACCTCGCG
AACACGCCCC GCTCCGCCGT CATCCGCGTG CCGGGAGTGC CCCACGCGCG GCTGACCGAC
GTGTTCGGCG GCGCCGCGTT CCCGCCCGTC GTCCCGCTCG ACGGCGACCC CGACGACGCC
GAGCACGCGG GGGTGGGTGC CGTGGTGATC ACCCTCGGGT CGCGGGACTT CTTCTGGCTC
CAGCTGGAGG CCGTGCATGG CTGA
 
Protein sequence
MTSAPDGRTD GDWYRTAVFY EVLLRSFSDS NASGAGDLRG LSSRLDHLEW LGVDCLWLPP 
FYPSPLRDGG YDVADYTAVA PEYGTLEDVR DLVAEVHARG MRVVVDLVMN HTSDAHPWFQ
ASRSHPDGPY GDFYVWRQDN TGYPDARIIF VDTETSNWTF DPVRREYFWH RFFSHQPDLN
FANPKVKEAM FDVVRFWLGT GVDGFRLDAV PYLFEEEGTN CENLPATHAF LAELRAMVDA
EAPGTLLVAE ANQWPGEVVE YYGTPEAPEC HMCFHFPVMP RIFYALRDQR ATSIVDILAD
TPDVPDGAQW GTFLRNHDEL TLEMVSTEER AAMYGWYAED PRMRANVGIR RRLAPLLGNS
RAEIELAHAL LLSLPGSPFL YYGDEIGMGD NIWLPDRDGV RTPMQWTPDR NAGFSTADPG
KVHLPLVQSL VHHYAAVNVE ALTAQSTSLL HWLRGMLEVR RRHPVFGRGD HEALASDNDA
VLAFLRRDES ETVLCVANLA NTPRSAVIRV PGVPHARLTD VFGGAAFPPV VPLDGDPDDA
EHAGVGAVVI TLGSRDFFWL QLEAVHG