Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1336 |
Symbol | |
ID | 7861636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1520220 |
End bp | 1521923 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643865420 |
Product | trehalose synthase |
Protein accession | YP_002881357 |
Protein GI | 229819831 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | [TIGR02456] trehalose synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGTCCG CTCCCGACGG CCGCACGGAC GGCGACTGGT ACCGGACGGC TGTCTTCTAC GAGGTGCTGC TGCGCTCGTT CTCGGACTCG AACGCCTCGG GCGCGGGCGA CCTGCGCGGC CTCTCGAGCC GGCTCGACCA CCTCGAGTGG CTCGGGGTCG ACTGCCTGTG GCTGCCCCCG TTCTACCCGT CGCCGCTGCG CGACGGGGGC TACGACGTCG CCGACTACAC GGCCGTCGCG CCGGAGTACG GCACGCTCGA GGACGTCCGC GACCTCGTGG CGGAGGTCCA CGCCCGGGGC ATGCGCGTCG TCGTCGACCT CGTCATGAAC CACACGAGCG ACGCGCACCC GTGGTTCCAG GCCTCCCGCT CGCACCCCGA CGGCCCGTAC GGCGACTTCT ACGTGTGGCG ACAGGACAAC ACCGGCTACC CCGACGCGCG GATCATCTTC GTCGACACGG AGACGTCGAA CTGGACGTTC GACCCGGTGC GCCGGGAGTA CTTCTGGCAC CGGTTCTTCT CGCACCAGCC GGACCTCAAC TTCGCCAACC CGAAGGTCAA GGAGGCGATG TTCGACGTCG TCCGGTTCTG GCTCGGGACG GGCGTCGACG GGTTCCGCCT CGACGCCGTC CCGTACCTCT TCGAGGAGGA GGGCACGAAC TGCGAGAACC TGCCGGCCAC GCACGCGTTC CTCGCCGAGC TGCGGGCGAT GGTCGACGCC GAGGCGCCCG GCACGCTGCT GGTCGCGGAG GCGAACCAGT GGCCGGGTGA GGTCGTCGAG TACTACGGCA CGCCCGAGGC GCCGGAGTGC CACATGTGCT TCCACTTCCC GGTGATGCCG CGGATCTTCT ACGCGCTGCG CGACCAGCGC GCGACGAGCA TCGTCGACAT CCTCGCCGAC ACGCCGGACG TCCCCGACGG CGCCCAGTGG GGCACGTTCC TGCGCAACCA CGACGAGCTC ACGCTCGAGA TGGTGTCGAC CGAGGAACGC GCCGCGATGT ACGGCTGGTA CGCGGAGGAC CCGCGGATGC GCGCGAACGT GGGGATCCGC CGGCGGCTCG CACCGCTGCT CGGCAACTCG CGCGCCGAGA TCGAGCTGGC GCACGCGCTG CTGCTCTCGC TGCCGGGCAG CCCGTTCCTG TACTACGGCG ACGAGATCGG CATGGGCGAC AACATCTGGC TGCCCGACCG CGACGGCGTG CGCACCCCGA TGCAGTGGAC GCCGGACCGC AACGCCGGCT TCTCGACCGC TGACCCCGGG AAGGTCCACC TGCCGCTCGT CCAGTCGCTC GTCCACCACT ACGCCGCCGT CAACGTCGAA GCGCTGACGG CCCAGTCGAC GTCGCTCCTG CACTGGCTCC GGGGCATGCT CGAGGTCCGT CGGCGGCACC CGGTGTTCGG GCGCGGCGAC CACGAGGCGC TCGCCAGCGA CAACGACGCC GTCCTCGCGT TTCTGCGCCG CGACGAGAGC GAGACCGTGC TGTGTGTCGC GAACCTCGCG AACACGCCCC GCTCCGCCGT CATCCGCGTG CCGGGAGTGC CCCACGCGCG GCTGACCGAC GTGTTCGGCG GCGCCGCGTT CCCGCCCGTC GTCCCGCTCG ACGGCGACCC CGACGACGCC GAGCACGCGG GGGTGGGTGC CGTGGTGATC ACCCTCGGGT CGCGGGACTT CTTCTGGCTC CAGCTGGAGG CCGTGCATGG CTGA
|
Protein sequence | MTSAPDGRTD GDWYRTAVFY EVLLRSFSDS NASGAGDLRG LSSRLDHLEW LGVDCLWLPP FYPSPLRDGG YDVADYTAVA PEYGTLEDVR DLVAEVHARG MRVVVDLVMN HTSDAHPWFQ ASRSHPDGPY GDFYVWRQDN TGYPDARIIF VDTETSNWTF DPVRREYFWH RFFSHQPDLN FANPKVKEAM FDVVRFWLGT GVDGFRLDAV PYLFEEEGTN CENLPATHAF LAELRAMVDA EAPGTLLVAE ANQWPGEVVE YYGTPEAPEC HMCFHFPVMP RIFYALRDQR ATSIVDILAD TPDVPDGAQW GTFLRNHDEL TLEMVSTEER AAMYGWYAED PRMRANVGIR RRLAPLLGNS RAEIELAHAL LLSLPGSPFL YYGDEIGMGD NIWLPDRDGV RTPMQWTPDR NAGFSTADPG KVHLPLVQSL VHHYAAVNVE ALTAQSTSLL HWLRGMLEVR RRHPVFGRGD HEALASDNDA VLAFLRRDES ETVLCVANLA NTPRSAVIRV PGVPHARLTD VFGGAAFPPV VPLDGDPDDA EHAGVGAVVI TLGSRDFFWL QLEAVHG
|
| |