Gene Bcav_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1325 
Symbol 
ID7858788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1506508 
End bp1508226 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content73% 
IMG OID643865409 
ProductABC transporter related 
Protein accessionYP_002881346 
Protein GI229819820 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGA CGCGGCGTGC CGCCGTGGGC GAGAGTGGGG TCATGGGCCA TCTCGAGATC 
TCCGGCGTGG AGTACGCGCT CGCTGACGGC CGCCCCCTCC TCGGCGGGGT GAGCCTGCGC
GTCGGGGAGG GCGCGAAGAT GGCGCTCGTC GGCCCGAACG GGGCCGGCAA GACGACGCTC
GTCCGACTCG TCGCGGGCGA GATCGACGCG GACTCCGGCG CGATCGTGCG ATCCGGAGGT
CTCGGCGTCA TGCCGCAGTT CATCGGGTCC GTCCGGGACG ACTCCACGGT GCGTGACCTG
CTCGTCCGGG TCGCGCCCCC GCGGATCCGT GCCGCGGCCC TGGCCGTCGA CGCCGCGGAG
CTGGCGCTCA TGGGCAGCGA CGACGAGCGC ACGCAGATGC GGTACGCGCA GGCGCTGGCC
GACTGGGCCG ACGCCGGCGG GTACGCGCAG GAGACGCTGT GGGACGTGTG CACGACGGCG
GCGCTGCACC TGCCGTACGA GCGCGTCGAG CACCGCGCGG TGACCACGCT CTCCGGTGGG
GAGCAGAAGC GGCTCGTGCT GGAGGCTCTG CTGCGCGGCC CGGACGAGGT CCTCCTGCTC
GACGAGCCGG ACAACTACCT CGACGTCCCG GCGAAGCGGT GGCTCGAGGA CCAGCTCGTG
ACCTCGGACA AGACCGTCCT GTTCATTAGC CACGACCGCG AGCTGCTCGC CCGGGTCGCG
ACCCGGGTGG CGACTCTCGA GCCCGGCGCG GCGGGCGCGA CGCTCTGGGT ACATCCCGGA
GGCTTCGGCA CGTACTACGC CGCGCGCGAG CAGCGCAACG CCGACCTCGC CGAGCAGCGC
CGTCGCTGGG ACGAGGAGCA CGCGAAGCTC AAGGCGCTCA TGCTGCTGTA CCGGCAGAAG
GCCTCGTACA ACTCCGACAT GGCCGCGCGG TACCAGGCCG CCACGACACG GTTGCGCAAG
TTCGAGGAGG CGGGGCCACC CGAGCTGGTC GCACACGAGC AGAACGTCCG GATGCGGCTG
CGGGGCGGTC GGACGGCGAA GCGCGCCGTC ATCGTGAGCT CGCTCGCGCT GACGGGGCTG
ACGACGGCGT TCGACGCCGA GATCTGGTAC GGCGAACGGG TGGGTGTGCT CGGTGCGAAC
GGGTCGGGGA AGTCGCACTT CCTGCGCCTG CTCGCAGGGG GCGGGACTGC GCCCGACGTC
GAGCACCGCC CGGTCGGCGA CGTCGCGCCG GAGCCCGTGG CGCACACCGG CGCGGTGCGG
CTCGGTTCGC GGGTGCGGCC GGGCTGGTTC GCGCAGACGC ACAGTCATCC GGCGTTCGTC
GGGCGCACGC TGCTGGAGAT CCTGCACCGG GGAGACGCTC ACCGGACCGG CCGCCCCCGG
GACGAGGCGG CGCGGGTCCT CGACCGGTAC GAGCTCGCCC GCGCCGGGGA GCAGACGTTC
GACTCGCTCT CCGGGGGCCA GCAGGCTCGC TTCCAGATCC TCCTCCTCGA GCTGAGCGGC
GCCACCCTCC TCCTGCTGGA CGAGCCGACC GACAACCTCG ACCTGCACTC GGCCGAGGCG
CTCGAGACCG GCCTCGACGC GTTCGACGGC ACGGTCGTCG CCGTCACGCA CGACAGGTGG
TTCGCGCGCA CCCTCGACCG GTTCCTCGTG TTCGGCGAGG ACGGAGGGGT GCACGCCTCG
GACGAGCCGA TCTGGGACCT GGCGCGCGCC GCTCGCTGA
 
Protein sequence
MGVTRRAAVG ESGVMGHLEI SGVEYALADG RPLLGGVSLR VGEGAKMALV GPNGAGKTTL 
VRLVAGEIDA DSGAIVRSGG LGVMPQFIGS VRDDSTVRDL LVRVAPPRIR AAALAVDAAE
LALMGSDDER TQMRYAQALA DWADAGGYAQ ETLWDVCTTA ALHLPYERVE HRAVTTLSGG
EQKRLVLEAL LRGPDEVLLL DEPDNYLDVP AKRWLEDQLV TSDKTVLFIS HDRELLARVA
TRVATLEPGA AGATLWVHPG GFGTYYAARE QRNADLAEQR RRWDEEHAKL KALMLLYRQK
ASYNSDMAAR YQAATTRLRK FEEAGPPELV AHEQNVRMRL RGGRTAKRAV IVSSLALTGL
TTAFDAEIWY GERVGVLGAN GSGKSHFLRL LAGGGTAPDV EHRPVGDVAP EPVAHTGAVR
LGSRVRPGWF AQTHSHPAFV GRTLLEILHR GDAHRTGRPR DEAARVLDRY ELARAGEQTF
DSLSGGQQAR FQILLLELSG ATLLLLDEPT DNLDLHSAEA LETGLDAFDG TVVAVTHDRW
FARTLDRFLV FGEDGGVHAS DEPIWDLARA AR