Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1316 |
Symbol | |
ID | 7858779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1490693 |
End bp | 1492729 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643865400 |
Product | Beta-galactosidase |
Protein accession | YP_002881337 |
Protein GI | 229819811 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1874] Beta-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACAT CGCACCCCGG GATCCCGACG CACGGACTCG CCTTCGGCGG CGACTACAAC CCCGAGCAGT GGCCCCGCGA GGTGTGGCAG GAAGACATGG CGCTGATGCG CCGCGCCGGC GTCACGACCG TGACCATCGG CGTCTTCTCC TGGGCGCTGC TCGAGCCGCG CGAGGGTGAG TTCGACGCCA GCTGGCTCGA CGACGTCACT CAGATGCTCG AGGGCGCCGG CATCGACTTC TTCCTCGCGA CCCCCACCGC GTCTCCGCCG CCATGGTTCG GCGTCGCGTA CCCCGACGCG CTCCCGGTCC GGCCGGACGG CGTCCGCCTC ACGCACGGGT CGCGCGACAC GTACGCCATC AGCGCCCCGG CCTACCGCGC CGCCGCACGG CGCGTCGCTC GGTTCCTCGC GCAGCGGTAC GGCGGGCACC CCGGACTGCG CGGCTGGCAC GTGCACAACG AGTACGGGAC CGTCGACGTC GGACCGCACG CCGCTGTCGC CTTTCGCGGC TGGCTGCGGG AGAAGTTCGG CACGCTGGAG GCGCTCAACG CGGCGTGGTC CACGGCGTTC TGGTCGCAGC ACTACTCCGA CTGGGCCGAG ATCACGCCGC CGCGGGCCAC GCAGTACCTG CCCAACCCGG CGCACGTCGT CGACTTCAAG CGGTTCTGCT CGGACGAGAT GCTCGCCGCG CACGCGGAGC AGAAGGCCGA GATCCGGGCG GCGGGCTCGA CGGCGCCCGT CACCACCAAC TTCATGCTCC CGTCGTGGAA CCACCTCGAC CAGTGGCAGT GGACCGACCA GCTCGACCTC GTCTCGGTCG ACCACTACCT CGAGGGGACC GGGCCCGACG GCGAGGCCCA CGTCGCGTAC GGCTCGGACC TCGTGCGGTC CTGGGCGGGC GGCGGACCGT GGCTGCTCAT GGAGTCCAGC GCCGGGGGGA TCCGCGACGG CGCCCGGTAC GCCGTCAAGG AGCCGGACCG GATGATCCGG AACTCGCTCG GCTACGTGGC GCGCGGGTCC GCCGGGTGCC TGTTCTTCCA GTGGCGGGCG TCGCTCGGCG GCGCCGAGAC GTGGCACTCA GGGCTCGTGC CGCACGCCGG AGCGGACAGC CGCGCGTTCG AGGCGGCCGT CCGGCTGGGC GACGCTCTGC AGCGGATCGC CGAGGTCGGC GAACCGCCCG AGTCCGGGCC GATCGTCGAG GCCGACGTCG CGATCGTCTG GGACGCGAAC GGGTGGTGGT CGCTCGAGAC GCCGCACCTG CCGCACGACG ACCTCTCCTA CGCGGCCGAG GTCCGGGCCG CGCACCGCTC GCTCTGGCGG GCGGGGGTCG CCGTCGACTT CGTGCGCCCC GGCGGGGACG TCTCGCGCTA CCGCGTGCTG CTGGTGCCGA GCCTGTTCGC GATGGACGAC GCGTGCGTCG AGTGGCTCAC GGCGTACGCG AGCTCCGGCG GTCACCTCGT GGTGTCGCAC TTCAGCGGGA TCGCGGACGA GCATCAGCGC GTGGTGCCCG GCGGCTACCC GGGTCGGCTG CGCGACCTGC TCGGCGTCCG TGTGCAGGAG CTGCGGCCCC TCGCCGCCGG GGAGAGGGTC CCGCTCAGCG ACGGCTCCGA GGTGGAGATG TGGACGGAGC GCGTGCACCT GGCGGGGTCG GACGCCGTGG CGACCTATGC CGACGGCGCT CTCGCCGGGC TGCCCGCCGT CACCCGCCGC GCGGTGGGCT CGGGTGCTGC CACCTACGTG TCGGCGCGGC CCACGCAGGA GTCCCGGGAC GCGTTCCTGT CCCGGTTGTG CGCCGAGCAC GGCGTGAGCG CCACCGTGCC GTCGGCCGTC GGGACCGGCG TGGAGGCGGT GCGCCGCCGC GGCCGGAACG GCACCTACCT CTTTCTCCTT CACCACGGGG ACGAGGCGGT GCGGGTCGTC GGACCCGGCG TCGACCTGCT CACCGGGATC CCCGCAGCGG ACGGTCTGGA CCTGGCACCG GGCGGCGTCG CCGTCCTGCG AACCGCCGGC GACGACTGGC TCGTGCAGCC CGCCTGA
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Protein sequence | MPTSHPGIPT HGLAFGGDYN PEQWPREVWQ EDMALMRRAG VTTVTIGVFS WALLEPREGE FDASWLDDVT QMLEGAGIDF FLATPTASPP PWFGVAYPDA LPVRPDGVRL THGSRDTYAI SAPAYRAAAR RVARFLAQRY GGHPGLRGWH VHNEYGTVDV GPHAAVAFRG WLREKFGTLE ALNAAWSTAF WSQHYSDWAE ITPPRATQYL PNPAHVVDFK RFCSDEMLAA HAEQKAEIRA AGSTAPVTTN FMLPSWNHLD QWQWTDQLDL VSVDHYLEGT GPDGEAHVAY GSDLVRSWAG GGPWLLMESS AGGIRDGARY AVKEPDRMIR NSLGYVARGS AGCLFFQWRA SLGGAETWHS GLVPHAGADS RAFEAAVRLG DALQRIAEVG EPPESGPIVE ADVAIVWDAN GWWSLETPHL PHDDLSYAAE VRAAHRSLWR AGVAVDFVRP GGDVSRYRVL LVPSLFAMDD ACVEWLTAYA SSGGHLVVSH FSGIADEHQR VVPGGYPGRL RDLLGVRVQE LRPLAAGERV PLSDGSEVEM WTERVHLAGS DAVATYADGA LAGLPAVTRR AVGSGAATYV SARPTQESRD AFLSRLCAEH GVSATVPSAV GTGVEAVRRR GRNGTYLFLL HHGDEAVRVV GPGVDLLTGI PAADGLDLAP GGVAVLRTAG DDWLVQPA
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